Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | QPSVREYNDCLRKDGESLWDSNGYWRCLFPNKEVPVALLDYKKAHLSNEILTKEDFTDAAKESSGKNVVDLGPKGVFFKQFNDYLNWKNSEYESVRKRREEAIKKANEEREHWKQLHDSQSQSMTTSGNDSSKKAVVSLSVQTSMDTDTDKNETVLREVRTQVFDDGTFTTTNITKSKPI |
1 | 1o54A2 | 0.07 | 0.04 | 0.61 | 0.80 | DisCoVER | | IVYPKDALDVK-EGDRIIDTGVGGMCLAVGSSGKVF-AY-EKREEFAKLAELIERV-----------------TIKVRDDEKDVDALF-------------------------------------------------LDVPWYIDKCWEALKGGGRFATVCPESLFHTAYMIFATKVCR- |
2 | 6mcpA | 0.11 | 0.07 | 0.64 | 0.67 | DEthreader | | TPLVIAYNNAPEDDKIQFYKINYLLW---LAKFSI--NPNASF-FLK-GMQFAKAITEEIKNKPE-----HLQRDQLLKEV-EFEKCATRYAEINFLLNLATKEIVERQTEILRLVAPKIAIKGVFMMR--------------------------------------------------- |
3 | 5yk9A | 0.09 | 0.08 | 0.97 | 0.64 | CEthreader | | RPVDQLIPEICETFPIADGVDFDVLAKIWQSIKGVVPVQDAFKLSLPASVTTHSDFLKNHHLDALYAFGIDYHHSSVNLYFDTYHPKHHTSEYYKNLLQDLQFQPPSDELLELLT-----NNGEIALTFNFASPRIERLCFYLPFLNREAVDNPGFILGWSFGPQGGKGTYTKVDVDYHG |
4 | 6u43A | 0.06 | 0.06 | 0.96 | 0.70 | EigenThreader | | AVIDKINKLIKGMKGKVAFGLNNWAISFMKKTGIGFKEVIEYCMEDQRCPLHAVVNDMVIRFLPNPVQAQKERIKVIWHGDKGSEIGKSMAN-------VKDLPKLVEVLRQVAKEDPTLKVTNQETGEHVEKPYRETVHAGPVEGKSPNRHNRFYIEIEPLSREPVMGLKVKLMDAKLH |
5 | 1vt4I | 0.17 | 0.12 | 0.67 | 0.46 | HHpred | | ----YQYKDI-----LS----------VFEDAFVDN--FDCKDQDMPKSILSKEEIDHIIMSKDASGTLRLFWQEEMFVEEVLRINYKFLMSPIKTEQRQPSMMTRIEQRDNQVFAKYN-VSRLQPLLELRPAKNVLIDGVL-------------------------------------- |
6 | 3hmjG | 0.10 | 0.08 | 0.75 | 0.45 | MRFsearch | | ---------------------------------RNQRIKEMYWKLWKDFEITAKEVYDFTHAVCEDFVSRPDRTMLAPMDFAIVVGWRAIIKAIFPNTVDG---------DLLKLVHLSNGYKMIPGAKPLQVGDVVSTTAVIESVVNQP--TGKIVDVVGTLSRNGKPVMEVTSSFFY- |
7 | 1fd9A | 0.12 | 0.08 | 0.72 | 0.49 | FFAS-3D | | -----------------------------------IGADLGKNFKNQGIDVNPEAMAKGMQDAMSGAQLALTE-----QQMKDVLNFQKDLMAKRTAEFNKKADENKVKGEAFLTENKNKPGVVVLPSG-----------LQYKVINSGNGVKPTVTVEYTGRLIDGTVFDSTEKTGKPA |
8 | 6em5r | 0.06 | 0.04 | 0.73 | 0.68 | SPARKS-K | | -----------------------------PQND-YIERHIKQHGKRLDHKRKREARESHKISERAQKL-----TGW--------------KGKQFAKKRYAEKVSMRKKIKAHEQSKVKRMITKHFTRRPVKMERIIRRQKKANVTHPELGVTVFLPILAVKKNPQSPVLTKGTIIEVNV |
9 | 1tpyA | 0.11 | 0.08 | 0.70 | 0.63 | CNFpred | | --FFARAHKILPPDGVLLLH---TITGLTPLTLWLARFLKFIATEIFGQPPTIEMVEEQSAKT----GFTLTRRQSLQPHYARTLDLWAEALQEHKSEAIAIQS--EEVYERYMKYLTGCAKL---------RVGYIDVNQFTLAK---------------------------------- |
10 | 1g8xA | 0.06 | 0.05 | 0.87 | 0.83 | DEthreader | | SDLFLTPIKFDGVMSELS---------TYSGLL-IFRRRNEVVR---------EQEEYLKEKINWPEYRFG-ITKIFFRQLARIEEAREQRLGSEQTKSDYLKRANELVQWINDKQASLES-RDFGDERQKIALLKYILKLWK-YLN-SIVQLNLFDCLESNLILAQTKDFWTGVSTYTL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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