Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | DDDAWATACAEDLAEEKARRRAEYGPPPGSAAEELRKFFDTVTDKLSGLQSPLLGAVAGPAAQQVVRQVVEQAKAAVEPVMERNPDVFDHLAAAGNELLAAYRSAVQAQEQRWTARAGDPKRPDKPADDPSDPRDDRDNGEGTGPGQRIDLD |
1 | 5ly9A | 0.07 | 0.07 | 0.91 | 0.70 | DisCoVER | | -AERTG-LKA-LCKLTTELS------KVSGEMLNEGRSARAAAYLKGSIDEFLLESLKENKCL-VTTNADTAA-QECALSMPTKPEAATRTQTGYPNLQ-FQPTTGT-CKLLSGHSTNGYPALDTTAKVLAGYMTIPNTQVEATLAWHAAR- |
2 | 6zxuB | 0.13 | 0.11 | 0.84 | 0.83 | DEthreader | | GVEEYARLFTR-FL--DG-PV--APLGIRANLKASAYFLDASVQ-FGR-EP--AGAEWIRGTNAARTDMRCAEIAAILSGYVRWMHPLAISASMRAYMRGAEIAGVMAAHCRRMGY----DLP-MSVD-----IDF-MWNREDTV----RWW |
3 | 2y44A | 0.08 | 0.08 | 0.98 | 0.54 | CEthreader | | ---KVEEVQTMCDVARQLRALETASQSAVAAVVSSAREASEAKERAEKAVERAKSKKRGVDTATEAAARAAAAAQRAETVVSDARKHAADLTAASKDAIETTDESLRLLATEADEPIRTAAKKCTGAAAESAFDALAELLPDGADDIREHGA |
4 | 3ok8A | 0.05 | 0.05 | 1.00 | 0.68 | EigenThreader | | APEMDQFYRSTMAINPALENLVYLGNNYLRAFHALSEAAEVYFSAIQKIGEQALQSSTSQILGEILVQMSDTQRHLNSDLEVVVQTFHGDLQFIKDSCQHYEIEYRHRAANLEKCMSELWRMERKRDKNAREMKESVNRLHAQMQAFVSESK |
5 | 2id3A2 | 0.15 | 0.07 | 0.49 | 0.22 | HHpred | | -----------------------PRADTGALEEDLRANARLVVRTLDD-------------------PRQGRLFRALIAASLCNEQAAEALHRFYAVRVDEWAGCVRDAVARGEVPD----------------------------------- |
6 | 5cwpA1 | 0.13 | 0.09 | 0.68 | 0.40 | MRFsearch | | --RELIERAKEAAERAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDP-------SSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRN---------------------------------------- |
7 | 6bfiA3 | 0.12 | 0.10 | 0.80 | 0.70 | FFAS-3D | | DSLEFMKVSEARIQADEAKRIALAEEDSSSVARQANRVIQVAKVEADNSENPEFVAK-LSSASESLAKSISPMVIEAKAVVTSNKDIQRKFCSSADKVVEGVAAVRSVIED--NWVPPRPPLPE---------------------------- |
8 | 6w2vA2 | 0.14 | 0.11 | 0.74 | 0.77 | SPARKS-K | | ----AVSAAAEAVKKAADLLKRHPGSE---AAQAALELAKAAAEAVLIACLLAPKSDIAKKCIKAASEAAEEASKAAEEAQRHPSQ------KARDEIKEASQKAEEVKERCERAQEHPNAGWLEH-------------------------- |
9 | 5cwmA | 0.14 | 0.10 | 0.73 | 0.59 | CNFpred | | DLEKALRTAEEAAREAKKVLEQAEKEGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQDPEVALRAVELVVRVAELLLRIAKESGS----------------------------------------- |
10 | 4us3A | 0.04 | 0.03 | 0.73 | 0.83 | DEthreader | | ---------L--ALIYSLLMIPAVPSGGPG--F------SSAVSLLEVPVAYMR-DWSRKQAAITLGVIITLLGIPSSLSFGVLGEVTLNIDSVDFIASSVFLLGGMIIALFIGWGWKTILRFIILVFLAF--------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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