Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | RPGTGPGRTRGRLPANWTQTMALQQAQTQAQTQAQPIKIPKKRGPKPGSKRKPRVVPN |
1 | 6wj2H | 0.12 | 0.10 | 0.90 | 1.17 | SPARKS-K | | TNIVNVNHVIQRVSDHASAMNKRIHYYSRLTTPAKALIAPDHVVPAPEECYV------ |
2 | 1sqqI | 0.11 | 0.10 | 0.97 | 1.06 | MUSTER | | -MLSVAARSGPFAPVLSATSRGVAGALRPLVQAAVP-ATSESPVLDLKRSVLCRESLR |
3 | 2eywA | 0.50 | 0.02 | 0.03 | 0.84 | DisCoVER | | ----------------------------------------------EG---------- |
4 | 4n9fb | 0.05 | 0.05 | 1.00 | 0.49 | CEthreader | | KRLVKHHMYISRKAKDWFYRISSEVHIPLGDAKLVITTYWGLHTGERDWHLGQGVSIE |
5 | 6pl5B1 | 0.06 | 0.05 | 0.93 | 0.57 | EigenThreader | | LFFALALFLLGLRAWQLQVLEYERYALRS----QGNYLKTEDIPAPGKRGVRAVEVNV |
6 | 2z6eB | 0.22 | 0.09 | 0.40 | 0.19 | HHpred | | ----------------------------------MGLALKKKSIPQPTNALKSFNWS- |
7 | 2pffB | 0.25 | 0.12 | 0.48 | 0.93 | MRFsearch | | --GGGGGGGGGMGMDLYKTSKAAQDVWNRA---------------------------- |
8 | 6ijoH | 0.13 | 0.10 | 0.79 | 0.29 | FFAS-3D | | --------SRRESLRALVALSGIAAIVTYGLKGAKDADLPITKGPQTTGENGKG---- |
9 | 6ypuv | 0.10 | 0.09 | 0.88 | 1.08 | SPARKS-K | | ---PQVKLKEGEPVDVAIRRFKRSCEKAGVLADVRK----REFYEKPTQERKRKKAAA |
10 | 1t11A | 0.12 | 0.07 | 0.59 | 0.33 | CNFpred | | KNRRFDGFRKGKVPMKMVAKMYGKAVRQDVLGEV------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|