>PF17178 (190 residues) MSMPWLAFVNIAFALMIFFRNFIFTYFDKRLLTHRAVIPYIEAALIAVIIISAILVIIAV TPRLAQGRYTLNIITGLLLALSLCWSLSNYCFIFFWTLPFAWPLLVILMTTGLTALYHHW PGITAFMLPLWVTALLAGIQLHYHTEIRFLILWAIFTAILLYGRRILQRWYDEAWDTHQE NMQLIQRLES |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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Seq | MSMPWLAFVNIAFALMIFFRNFIFTYFDKRLLTHRAVIPYIEAALIAVIIISAILVIIAVTPRLAQGRYTLNIITGLLLALSLCWSLSNYCFIFFWTLPFAWPLLVILMTTGLTALYHHWPGITAFMLPLWVTALLAGIQLHYHTEIRFLILWAIFTAILLYGRRILQRWYDEAWDTHQENMQLIQRLES | |||||||||||||||||||
1 | 3rkoB | 0.07 | 0.07 | 0.97 | 1.05 | CNFpred | -----LMWATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFHLMTHALLFLASGSVILA-IPLVYLCFLVGGAALSATAGFFSKDEILAGAMAHINLMVAGLVGAFM | |||||||||||||
2 | 6r3qA1 | 0.11 | 0.10 | 0.95 | 1.17 | DEthreader | LDVLLSTTVFLILSITC-FLRYGAAS-----P--P--PPAALAVFGAALLLEILSLVVSVRMREWIAGWPRHFIGAILVSLPALAVYSHVTSEFENSTMFTGSAVLTAVVQYCNFCQLSSMRSSLATVVGAGPLLLLLYVSASLIGQEVILVFFLLLLLVWFLNREFEVSYRLHYHGDVEADLHRTKIQS | |||||||||||||
3 | 6xjhA | 0.08 | 0.06 | 0.71 | 0.70 | DisCoVER | GSVFAAAKWLIIGLMFVVTITYMVKTRVGYI------ISKTISIILISILFALIHYVILIVVQAGKNLAFSKYVDNLWFFLIFLLFFGLFLFLITLASQKTAMIFSLGPFLTDKMI-SS--N--FQVISLGSIVIFFILNIVAKK--------------------------------------------- | |||||||||||||
4 | 3mk7A | 0.10 | 0.07 | 0.77 | 0.83 | DEthreader | RLRPLHTNAIFAFGGCALFATSYYSVQRTCQVHIYVGNWFFGAFILTVAILHVVNNLEKSYS-LYAGATDAMVQWWYGHNAVGFLTAGFLGIMYYFVP--------------------------------------YSYRLSIVHFWALITVYAVMSLPMAITVNALSHIQGLMWFESLESH-FV--M-- | |||||||||||||
5 | 6nwfA | 0.05 | 0.05 | 0.97 | 0.59 | CEthreader | -MTQAWLWIGVISMALGSVFFGFGAHN-----AKNERWQILYTLNFFICLIAAGLYLAMALGLGVNVINGRPTYWVRFVTWFCSTPLLLLDLTFLGRTSLPLTGSLLGANAYMLVTGFMSYIWYIVSCAAYLAIVYLLAQPYRIAVTVHLVLWTLYPIVWILSPEGFSTFTQGSETMFYTLLDIASKVGF | |||||||||||||
6 | 1x86A1 | 0.07 | 0.05 | 0.72 | 0.75 | EigenThreader | IKRQEVINELFYTERAHVRTLKVLDQVFSELRKIFSNLEDILQLHIGLNEQMKAVRKRN--ETSVIDQ-----IGEDLLTWFSKLKHAAATFCSNDIIPTQMQRLTKYPLLLDNIAKYTEEKVKKAADHCRQILNFVNQAVKEA---------------------------------------------- | |||||||||||||
7 | 6v8qA2 | 0.14 | 0.12 | 0.85 | 0.29 | HHpred | SWGHWFALFNILLATLLGSRYLFVADWPTTAGRIYSYLSIVHFSFLVFATYLLILFPLTFIVMS---QRLMRF---LSAILATAGMTLIDVFTRFHHLNPVWELV----INP------ARDWLMFISVPVILATWSWQKLRSLH-FARPL---AAFFFVSFIASHLIYIWADANFYRPITMQ-------- | |||||||||||||
8 | 6v8qA | 0.10 | 0.09 | 0.96 | 0.45 | MRFsearch | -WGHWFALFNILLATLLGSRYLFVADW-PTTLAGRIYSYLSIVGHFSFLVFATYLLILFPLTFIVMSQRLMRFLSAILATAGMTLLLIDSEVFTRFHLHLNPIVWELVINPARDWQLMFISVPVILLIEMLFATWSWQKLR----SLHFARPLAAFFFVSFIASHLIYIWADANLSYPMTARRFLEKHG- | |||||||||||||
9 | 4ry2A1 | 0.08 | 0.07 | 0.93 | 0.87 | FFAS-3D | --VLCIFLASLLYTALGIAGSFYIKFLFDDLIKFEKLNDLHIISAGFAVIFLLQIFLNY-----------YRSILVTKLGMSIDKSIMMEYYSHVLKLPMNFIISRFMDASKIRQAISGATLTIMIDTIMAVIGGILLYIQNSSLFFISFIIILLYGIIVTVFNKPIQNANRQIMEDNAKTSALVESVK- | |||||||||||||
10 | 6w4sF | 0.09 | 0.09 | 1.00 | 0.86 | SPARKS-K | SAKFLLYLGHSLSTWGDRMWHFAVSVFLVELYGNSLLLTAVYGLVVAGSVLVLGAIIGDWVDKNARLKVAQTSLVVQNVSVILCGIILMMVFLHKHELLVLTSCYILIITIANIANLASTATAITIQRDWIVVATIRRIDQLTNILAPMAVGQIMTVIGCGFISGWNLVSMCVEYVLLWKVYQKTPALAV | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |