Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | TKSIFTFDVGGKVTLTVTFLSPVYPDDMARQSLQFSYISVKAKSSDGTPHDVQVYMDVSGEWASGDHSQVVEWDTSTSDDIVYHHFSRANQQQFVESREIASWGQWYLATRSGNSMTWQIGQDTVVRDQFVNNGRLANTKETNFRPVSDRWPVFAFSHDLGNVSEEVESVFTLGLVQNQVIHFAGLSGELTAVPGLWSSHYDNEISAVVAFYNDYQHASEASSALDQKIQRD |
1 | 5fjsA | 0.14 | 0.12 | 0.88 | 1.17 | DEthreader | | YNSWYTYTNDLPVQLAVKQFSPIIPYNYKETSYPVAVFKWTAY-----NVDVS-MFTWQN-MIGFFVNSGNFNKIIKDSEIVAAVMGNSNDNEE-------WNGEYSIGVKKVVDISYKAKFTGDLWHEF------DNKDDETPTK-QD-GIGSAIAVNFKLQPQTIEVPFALSWDLP-IMKFG---GGDKWY-KMYTKYFGNSFAILKEALNNYQKWEKMIDDWQKIKTAL |
2 | 5fjsA1 | 0.14 | 0.13 | 0.90 | 1.17 | DEthreader | | PNSWYTYTNDLPVQLAVKQFSPIIPYNYKETSYPVAVFKWTAY-----NVDVS-MFTWQN-MIGFFVNSGNFNKIIKDSEIVAAVMGNSNDNEE-------WNGEYSIGVKKVVDISYKAFVTTGDGSDLWHEF--DNKDDETPTK-QD-GIGSAIAVNFKLQPQTIEVPFALSWDL--PIMKFG-GGDKWYKYTKYFG---NSFAILKEALNNYQKWEKMIDDWQKILKTL |
3 | 4c1oA1 | 0.15 | 0.12 | 0.82 | 2.03 | HHpred | | HVSTDTWKAG---DLTFTIYSPVKSEDLKFALVPAVIAELTIDNTKG-TSPRRAFFGFEGN-DPY---TSMRRIDDTCPPLRGVGQG----------------RITAIVSK-HSDVRSAL--------HFSLEDILTTPLEENW--TFGLGKVGALIMDTPA-GMKRTYQFAVCFYRSGYATA-G-----LDTSYFYTRFFKNIEEVGKYALDHIEALKERAFQSNQLIERD |
4 | 1v7vA1 | 0.11 | 0.08 | 0.75 | 0.80 | DisCoVER | | LSYSKFQCDYNGIHARKTLFVP-K-------GEDAEIWDVVIKNTSDQVRTISAFSFVEFSFSDQMSLYSAGTAY----RPGLIEYDLYYN-------TDDFEGFYYLASTFD-PDSYDGQ-RDRFLGLAVEQGRCS--NS--AQTCY--NHCGSLHKQFTLQPGEIRFAYILGIGK------------------------GNGERLREHYQANIDAAFAAIKAHW------ |
5 | 5fjsA | 0.14 | 0.12 | 0.90 | 0.90 | MRFsearch | | --SWYTYTNKLPVQLAVKQFSPIIPYNYKETSYPVAVFKWTAYN-----VDVSMFTWQNMIGF---FVNSGNFNKIIKDDSEIVAAVM-----GNSNDNEEWNGEYSIGVKKVVDISYKAKDGSDLWHEFDNKDD--------ETPTKQDGIGSAIAVNFKLQPQTIEVPFALSWDLP-IMKFGGGDKWYKMYTKYFGKNGKNSFAILKEALNNYQKWEKMIDDWQKPILSN |
6 | 5fjsA | 0.13 | 0.12 | 0.90 | 1.65 | SPARKS-K | | PNSWYTYTNDLPVQLAVKQFSPIIPYNYKETSYPVAVFKWTAYNVDVSMFTWQN-------MIGFFVNSGNFNKIIKDDSEIVAAVMGNS------NDNEEWNGEYSIGVKKVISYKAKFVTTGDGSDLWH-----EFDNKDDETPTKQDGIGSAIAVNFKLQPQTIEVPFALSWDL-PIMKF----GGGDKWYKMYTKNGKNSFAILKEALNNYQKWEKMIDDWQKPILSN |
7 | 5fjsA1 | 0.15 | 0.13 | 0.88 | 1.29 | MAPalign | | PNSWYTYTKDLPVQLAVKQFSPIIPYNYKETSYPVAVFKWTAY-----NVDVS-MFTWQN-MIGFFVNSGNFNKIIKDSEIVAAVMGNSNDNEE-------WNGEYSIGVKKVVDISYKKFVTTGLWHEF-----DN---KDDETPTKQDGIGSAIAVNFKLQPQTIEVPFALSWDLPIM-KFGG----GDKWYKMYTKYFGNSFAILKEALNNYQKWEKMIDDWQKPIL-- |
8 | 5fjsA | 0.13 | 0.12 | 0.92 | 1.18 | CEthreader | | PNSWYTYTNKDLVQLAVKQFSPIIPYNYKETSYPVAVFKWTAYNVDV------SMFTWQNMIGFFVNSGNFNKIIKDDSEIVAAVMGN-------SNDNEEWNGEYSIGVKKVDISYKAKFVTTGDGSDLWHEF----DNKDDETPTKQDGIGSAIAVNFKLQPQTIEVPFALSWDLPIMKFGGGDK-WYKMYTKYFGKNGKNSFAILKEALNNYQKWEKMIDDWQKPILSN |
9 | 4c1oA1 | 0.15 | 0.12 | 0.82 | 0.60 | MUSTER | | HVSTDTWKAGD---LTFTIYSPVKSEDLKFALVPAVIAELTIDNTKG-TSPRRAFFGFEG----NDPYTSMRRIDDTCPPLRGVGQG----------------RITAIVS-KHSDVRSALH--------FSLEDILTTPLEENWT--FGLGKVGALIMDTPA-GMKRTYQFAVCFYRS------GYATAGLDTSYFYTRFFKNIEEVGKYALDHIEALKERAFQSNQLIERD |
10 | 4c1oA | 0.14 | 0.11 | 0.81 | 3.85 | HHsearch | | HVSTDTWKAG---DLTFTIYSPVKSEDLKFALVPAVIAELTIDNTKG-TSPRRAFFGFEGNDPY----TSMRRIDDTCPPLR-------------GVGQGRITAIVSK-HS---DVRSAL--------HFSLEDILTTPLEENWTFGLGKVGALIMDTPAGM---KRTYQFAVCFRSGYATA--G-----LDTSYFYTRFFKNIEEVGKYALDHIEALKERAFQSNQLIERD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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