>PF17163 (188 residues) ELTLARPDFPYLTLVDEEGQEYRMDRQSMYHYSVSGDFSQKMKAYIKTPKVGEHGNELTF GWEDNTIAVGSTTSIPFSNTEPGNYTIQFNTFNYEASPFAKLLLNGKEMELVENDVYAVK LSLKQNDILTFEGVPAYDEWWIDPDFFEKQEDGTLKFLPIDGSYQITANGKRQYFSVIAL KDGEAAKL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | ELTLARPDFPYLTLVDEEGQEYRMDRQSMYHYSVSGDFSQKMKAYIKTPKVGEHGNELTFGWEDNTIAVGSTTSIPFSNTEPGNYTIQFNTFNYEASPFAKLLLNGKEMELVENDVYAVKLSLKQNDILTFEGVPAYDEWWIDPDFFEKQEDGTLKFLPIDGSYQITANGKRQYFSVIALKDGEAAKL | |||||||||||||||||||
1 | 4fe9A | 0.16 | 0.14 | 0.92 | 1.65 | HHpred | TLQPATPAVDGYYIVGDFNSAQQMKKDDENLYILEAEISTSFK-IFPAIDWTK-----ALGSSVNFVSWTNAGAINT--ALDGKIKISFDAFRFTVKDNSYMGTALVPVNGT-KGTFWGIFYFAANDQVKFAPQANWGNDFGFVDALS-DEGGNLKV-GIAGWYLVYVSGDDKVIEFEKPN-VYL--- | |||||||||||||
2 | 4fe9A | 0.15 | 0.13 | 0.87 | 1.20 | MRFsearch | ---------DGYYIVGDFNSAQQMKKDAENLYILEAEIESNFKIFPA---SAINGNDIDWTKADNFVSWTNAGAINTA--LDGKIKISFDAYRFTVKDNSELYMTLVPVNGTK-GTFWGIFYFAANDQVKFAPQANWGNDFGFVDAISQDEGGNLKVG-IAGWYLVYVSVIDKVIEFEK--------- | |||||||||||||
3 | 4fe9A | 0.14 | 0.14 | 0.96 | 1.45 | MAPalign | ------VDPDGYYIVGDGNSAQQMKKDDENLYILEAEIESTSNFKIFPASAIDWTKALGSSDDSGDNFVSWTNAGAINTALDGKIKISFDAFRFTVKDNSELYMTWKALVPVTKGTFWGIFYFAANDQVKFAPQDFGFVAISKDLAGLSDEGGNLKVGI-AGWYLVYVSVIDKVIEFEKPVPGTADGE | |||||||||||||
4 | 4fe9A | 0.12 | 0.12 | 1.00 | 1.44 | CEthreader | PATTPAVDPDGYYIVGDFNSAQQMKKDDENLYILEAEIESTSNFKIFPASAINGNDIALGSDDSGDNFVSWTNAGAINTALDGKIKISFDAFNYRFTVKDPNAWKALVPVNGTKGTFWGIFYFAANDQVKFAPQANWGNDFGSKDLAGLSDEGGNLKVGIAGWYLVYVSVIDKVIEFEKPNGDTSYNG | |||||||||||||
5 | 4fe9A | 0.15 | 0.14 | 0.95 | 3.00 | HHsearch | TLQPATPAVDGYYIVGDFNSAQQMKKDDENLYILEAEISTSFK-IFPAIDWTK-----ALGSSVGNFVWTNAGAIN--TALDGKIKISFDAFRFTVKDNSEMGTALVPVNGT-KGTFWGIFYFAANDQVKFAPQANWGNDFGFVDAIASDEGGNLKV-GIAGWYLVYVSGDDKVIEFEKPNGDTYNGD | |||||||||||||
6 | 4fchA | 0.09 | 0.08 | 0.91 | 1.15 | CEthreader | -----LTPPKTMFIVGSMKVWKPMAGVYGMDGQFYSMIYFDANSEFKFGTKENEYIGIVTVTDKAGAGVSGSDNFVVENAGWYLFYVKAAVKTITFYPAEVYLFGEWKFTVPTKDGNFVSPAMTASGEVRMCFKTDLDWWFTLHDDSWTEKGDGYSIQGSAGN-VIHLNFTAGTGEKK---------- | |||||||||||||
7 | 4fe9A | 0.11 | 0.10 | 0.88 | 2.59 | HHsearch | RFTVKDNSPTELYMTGSAGALVPVNGT-KGTFWGIFYFAADVK-FAPQANWGN-----DFGFVDAALS-DEGGNLKV--GIAGWYLVYVSGDVIEFEKPNVYGWDVEQDLFTADGEFVSPAFLKDG-AVRPKAGDWWKTEFIIFDGYRGNGGDQAAVQGKTGQ-KVYLNFGNGTGRIE---------- | |||||||||||||
8 | 4fe9A | 0.04 | 0.03 | 0.75 | 0.83 | DEthreader | VMATTPAVDDGYYIVGDFTSAQQMKKDADENLYILEAEISTSNFKIFPASAN-IDTKALGSSVSDNFVS-TNAGAINTALDGKIKISFDAFNYRFTVKNSAPTEL-------------YMT---Y-----------------WGTPAG-------DPNAWKIFYVKFAP---GNDFGLKVAGWADG-- | |||||||||||||
9 | 3ua3A | 0.07 | 0.05 | 0.76 | 0.83 | DEthreader | ---------------FEDQIDVEAVGA-KDLG-------GGGPIKISEEYNRQESLKVKLYIVRLPQPDI----IVSELLGSGDS----K-TTISIQKYTSYVKATTKPVFTSERSDSIEFVDRNADLGFAGYFPAV--IPLRDQL-----------RVGEDRISLKIDRKWYEWHVEKKKTNGESVS | |||||||||||||
10 | 4fe9A3 | 0.13 | 0.05 | 0.41 | 0.83 | HHpred | ------------------------------------------------------------------------------------------------------GNSAQQMKKLDENLYILEAEIESTSNFKIFPAIDWTKLGSDDNFVSWTNAGAIN-TALDGKIKISFDAFNYRFTVKDNS------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |