>PF17133 (221 residues) FDFCDYPEVSSYIAAKGKGQLYQQVSRDDDDTYTALTKFIGRQEIVPQVSSYKIEMGPSG TLASDWSYLSYCTKGANTSGNWTKLMNNDALVVNIGYNGTLDLTIPPILAGKYRITLYYA YDPSMKFIGERGEGSQAGLTNFRLDSKRLAGGDNKRIYDGKTGDVQDCFNTPLTSNLSGE ETAFEFTTTASHTLNVVVVDPAASSHNKFRMYFDYILFEPV |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | FDFCDYPEVSSYIAAKGKGQLYQQVSRDDDDTYTALTKFIGRQEIVPQVSSYKIEMGPSGTLASDWSYLSYCTKGANTSGNWTKLMNNDALVVNIGYNGTLDLTIPPILAGKYRITLYYAYDPSMKFIGERGEGSQAGLTNFRLDSKRLAGGDNKRIYDGKTGDVQDCFNTPLTSNLSGEETAFEFTTTASHTLNVVVVDPAASSHNKFRMYFDYILFEPV | |||||||||||||||||||
1 | 6h3iA | 0.12 | 0.11 | 0.90 | 1.00 | DEthreader | DDFEGS--QS-T-IDMRSLYT-QTDIRRWIQ-FKI-PVSQPDFRVRG-E--WRRYTGTLDDGV--EFDVAAVNINGTKCVNYVMPRNEQALAVRIGLSRAVFKNVSVDMRQYKKLKMFLHAESLPPTLED-----DEMVGFIRFGNFYQVE--IPLKVT-KTG-SSISDLVWMDDNSIDLALDLTPNFGLVRNLMVGVKSRAHKDI-KGEVWFNELRLADL | |||||||||||||
2 | 6h3iA | 0.06 | 0.05 | 0.87 | 1.00 | DEthreader | FGSQST------STNFEQGNVEYIQFWVTDWIQF-KIP-VSQPFLVRGE-WRRYTGTLDDGV---EFDVAAVNINGTKCPVNYVMEQALAVRIGGLQDSRAVFKNVSVDMQYKLKMFLHAESLPNQPT-----LEDDEMVGFRFGFYQV-EIP-L-KVTK-TG---SIS--LVWMDDNSIDLALDNFGLVRNLMVGVKSRADHK---DIKGEVWFNELRLA | |||||||||||||
3 | 6f2pA2 | 0.12 | 0.07 | 0.63 | 1.09 | HHsearch | ---------IPI--------------------------------------PNPYEAEALPINALTDTPVVY---------NDANASGGKKLGFNNNVDDYVEFSLDVTQPGTYDVKSRIMKS---------T---NSGIYQLSINGTNVGSAQDMFW-T--TSE-LSKE------FT---MGSYSFTSPGSYLFRLKTTGKNVSSS-GYKLMLDNFSLVST | |||||||||||||
4 | 5wppA | 0.10 | 0.07 | 0.76 | 1.00 | DEthreader | INAGFE--D---P--------FIEVVD-----DY-TV--D---T-PP-G-WTTYNPNNLV--TTMTSNNGVGYVGPGTQFYQLAPEGRNIGYIYLAQVAGFEQILDATLETKYTLMVDVGNFGGESLAG-------FPGYRVELLTVLAADHNNLYIK------------DGEFKTS--TVTFTATPLDQKLGIRLINLLQGT-F---SGLDFDNVRLTVE | |||||||||||||
5 | 1i5pA | 0.12 | 0.09 | 0.74 | 1.00 | DEthreader | SSGN-SNYILSNYSGVSSGSIRNIS-----------DL-RPLHNQVGTMIHATQVNN----Q---TRTFISE---------KFGNQG-DSLRFEQS-NTTARYTL-RGNGNSYNLYLRVSS------I------G-NSTIRVTINGRVY-TVSNVNTT---T-NNDGVNDGARFSDI--NIGNIVASDNTNVTLDINVT-LNSG----TPFDLMNIMFVPT | |||||||||||||
6 | 6f2pA2 | 0.12 | 0.07 | 0.62 | 0.77 | HHpred | -------------------------------------------------IPNPYEAEALPINALTDTPVVY---------NDANASGGKKLGFNNNVDDYVEFSLDVTQPGTYDVKSRIMKS---------T---NSGIYQLSINGTNVGSAQDMFW-T--TSEL-SKE------FT---MGSYSFTSPGSYLFRLKTTGKNVSSS-GYKLMLDNFSLVST | |||||||||||||
7 | 2w47A | 0.06 | 0.04 | 0.57 | 0.57 | DisCoVER | VIYQ----------------------------A--E--------------DAIIYN------------AILE---TV----NAGYTGSCYVNYHNEVGGYIEWNVNAPSSGSYALIFRYANG-----TT------ANRPMRITVNGNIVKPSMDFVST----------GAWTTWNEA---GIVANL-NQGNNVIRATAIASDG------GPNVDYLKVFS- | |||||||||||||
8 | 6f2pA2 | 0.11 | 0.06 | 0.59 | 0.37 | MRFsearch | --------------------------------------------------PNPYEAEALPINALTDTPVVYND---------ANASGGKKLGFNNAVDDYVEFSLDVTQPGTYDVKSRIMKS------------TNSGIYQLSINGTNVGSAQDMFW-------------------KEFTMGSYSFTSPGSYLFRLKTTGKNVSS-SGYKLMLDNFSLVST | |||||||||||||
9 | 5wppA | 0.08 | 0.06 | 0.84 | 0.79 | SPARKS-K | ------------SVVSIPINNAGFEDPFIEVVDDYTVDT---------PPGWTTYNPNNEKRTTMTSNNGVGYVGPGTQFYNQLAPERNIGYIYLAQVAGFEQILATLEPDKYTLMVDVGNFGGEFQ-KISLAGFPGYRVELLAGDTVLAADHN--NLYIKDG-EFKTSTVTFTATPDNPY------LDQKLGIRLINLL----QGTFSGLDFDNVRLTVE | |||||||||||||
10 | 5wppA | 0.09 | 0.07 | 0.78 | 0.63 | MAPalign | IPINNAGFEDPFIEVVDDYTTPP--------------------------GWTTYNPNVPEKRTTMTSNNGVGYVGPGTQFYQLAPEGRNIGYIYPGGVAGFEQILATLEPTKYTLMVDVGNF---GGEFQKISLAGFPGYRVELLAVLAADHNNLYIK------------DGEFKTS---TVTFTATPDQKLGIRLINLLQGT----FSGLDFDNVRLTVE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |