Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | WDLALKRYTAAVGRQLDDPSLPHPSSVEELLNRLDSQNGHFSQFRENKRSLFNILTCICNPIERFGSMAASIASNAFPASSVCFSAITYLIDAAKDVSASYNAVIELFFTLKDFLVRLAIY |
1 | 6grjG | 0.05 | 0.05 | 0.98 | 1.17 | DEthreader | | NKQQ-PNGLDLAKGHADL--NTPQTNSSDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQGVLAQLNGDIDKVNAASLGARQDLYQKRSSLNSEVLIATQIGNGYKGLQVQAQNAVTATQN |
2 | 6dlcA | 0.09 | 0.06 | 0.62 | 0.67 | DisCoVER | | ----------------------------------------LYKLK----TFLENLRRHLDRLDKHIKQLRDILSPEDERVKDAIDLSERSVRIVKTVIKIFEDSVTLEKILQTATKIID-- |
3 | 4mt1A | 0.09 | 0.08 | 0.88 | 1.00 | DEthreader | | AWISIFIIAAGIGIK--LI-MVLVF--VVMYLFLQNYTEMAGLPPKETKKAMQISGAVIGITAVLISVF-VPLAMFYQFALTMASSIAFSAFLALTTPALCAT-------LRRII-VFVPL |
4 | 4fzsA | 0.03 | 0.03 | 1.00 | 0.46 | CEthreader | | QLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFK |
5 | 3g67A | 0.12 | 0.12 | 1.00 | 0.72 | EigenThreader | | FQELVGDFQAKSDQLVSVIQDTNVDQIVERVKEASSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGKGFMIVANEVQNLSNETNEVTKQIVESSQRSLENLEFMANLFET |
6 | 4k92A1 | 0.12 | 0.11 | 0.88 | 0.27 | HHpred | | ---DEEDFIKAFD-DVPV---VQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRQHLRLLDGAFKLSA--KDLRSQVVREACITLGHLSSVLGNKFDHGAEAI-P--TIFNLI--- |
7 | 4avmA | 0.10 | 0.09 | 0.94 | 0.35 | MRFsearch | | --RAQEKVLQKLGKAVET----KDERFEQSASNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSSGHEELKAIVWNNDLLWEDADQAVRTMEIYVAQFSEIKERIAKRGR- |
8 | 3swhA1 | 0.14 | 0.14 | 0.98 | 0.78 | FFAS-3D | | WHGALER-DKKDGFQQTSEHALFSCSVVDVFSQLNQSFEIIKKPQIVGHYMRRFAKTISNVLLQYADIVSKDFASKEKVPCILMNNTQQLRVQLEKMFEASGTLKELQVKLNNVLDELS-- |
9 | 5cwqA2 | 0.14 | 0.12 | 0.84 | 0.71 | SPARKS-K | | -------------------SEEAERASEKAQRVLEEARKVSEEAREQDEVLALALIAIALAVLALAEVACCRAERAYEDARRVEEEARKVKESAEEQSEVKRLAEEAEQLAREARRHVQEC |
10 | 2l10A | 0.19 | 0.19 | 0.98 | 0.59 | CNFpred | | VDNALRAVGDASKRLLSDLLPPSTGTFQEAQSRLNEAAAGLNQAA-TPQDLARASGRFGQDFSTFLEAGVEMAGQAVSNLKGISMSSSKLLLAAKALS-LKSQLAAAARAVTDSINQLITM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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