>PF17097 (378 residues) METQAVKTIRDELRELENTVAQASDMVLSEQDHRNASAIREMTQSVIAMSKENSLISVSN EIDYNEEIGNLAIDPSLIDEKIKQSNNFVELLKLTHLEQEALDYFLRYTISSTNTLELES TSDPKFVSLENEVTELENKTLTEHRDKIQEAKKDISDKSKDLANKQDQINELCLGAANSV DECWKMLNELEDIHSQRDNDVKETLSQDTTTTSDLIEETYKEWSSLQTSLTELNNSKDEL DQLIAFKNEKHKDNDSTKIRNANIKNKTITENVKMLKLLINFWESNFIVPGSKKSKLSNL EVYPQTKKFQFKCAEQYTVIIQLNQNGGSIKSIEIFENDGKSVQENKNLSSLILNKYKNP LSSYPIFQVINDIVEELK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | METQAVKTIRDELRELENTVAQASDMVLSEQDHRNASAIREMTQSVIAMSKENSLISVSNEIDYNEEIGNLAIDPSLIDEKIKQSNNFVELLKLTHLEQEALDYFLRYTISSTNTLELESTSDPKFVSLENEVTELENKTLTEHRDKIQEAKKDISDKSKDLANKQDQINELCLGAANSVDECWKMLNELEDIHSQRDNDVKETLSQDTTTTSDLIEETYKEWSSLQTSLTELNNSKDELDQLIAFKNEKHKDNDSTKIRNANIKNKTITENVKMLKLLINFWESNFIVPGSKKSKLSNLEVYPQTKKFQFKCAEQYTVIIQLNQNGGSIKSIEIFENDGKSVQENKNLSSLILNKYKNPLSSYPIFQVINDIVEELK | |||||||||||||||||||
1 | 2p7nA1 | 0.08 | 0.03 | 0.38 | 0.68 | DisCoVER | ---------------PA-LAA-ARKADELGQAAREVRAS-VER--QTAYE--TRLAQRSAA---FSGGEPPARREA-P---GA-ELDEARNAQTVSARLFEGNLKGVAQSKQALQYSANAAGGADSDLW--DI--SD-QIGKIKKAFSL--SQLTQKYSNANSLFDNLVKVLSSTISSCL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ | |||||||||||||
2 | 5w1hA | 0.09 | 0.06 | 0.68 | 0.67 | DEthreader | -EIKAEEMLQRETAVYVAFAARHLSSQTLTILQYFGGH--------------------------------------------LWTDFPFDKYLDDVDFLTDLKDVIYSM-RND---SFHYA--TH--NNGKWNKEL------------------S-VAGSE-----------RFLSPAQANHMLGFLHSYKQYVWDIYRRASTEINH--IAEDKIAGVDITDVDAVIDLSVKLCGTISSLNRNIILSEDRVSRSDIVEYKLKNKKFQEMKNIFRDLMDYSEIADE-QGQINWIYLE----------------ELRNYIEH--------------FRYY---SSF-D-RSFLGIYSEVFVPTILYNILLQHVVSIIRLM | |||||||||||||
3 | 5j1iA | 0.07 | 0.06 | 0.88 | 0.64 | CEthreader | IRLQLEACETRTVHRLRLPLDKEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALSPAAPTLRS--ELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQAVPATLPELEATKASLKKLRAQAEAQ-----QPTFDALRDELRGAQEVGERLQQRHGERDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-------------------DSQAVREQLRQEQALLEEIERHGEKVEECQR----------FAKQYINAIKDYEL----QLVTYKAQLEKVQSGSESVIQEYVDLRTHY------SELTTLTSQYIKFIS | |||||||||||||
4 | 4wsbC | 0.07 | 0.06 | 0.77 | 0.78 | EigenThreader | SMERIKELMEMVKN-----------SRMREILTTTMAVIKKALRMKWMMREMIPE--KDEDGNTLTKDAGSNVSPNAVTWWNRAGPRVYKMYFDRLERLTH-------GNQVKNPGHKDLTSREAQEVIMEVVFAQLTITKEKKEELIMVAYMLERELV-----------RTYVEVLHLTQ-------------------------GTCGGEAENDDLDQTLIIASRNI------VRRSIVALASLLSMCHTTEPLVEILRSNPTDEQAVNICKAALG-----------IRINNGYNFK-RVKGSYEEFNVSGKRASAVLKKGAQ----RIQAIIGGRTLEDILNLMITLMVFS--------QEEKMLKAYQLLRHFQ | |||||||||||||
5 | 6ianA | 0.12 | 0.08 | 0.66 | 0.36 | HHpred | ---PKITELTTEIERLNEQEELIVKSVLTQLQQRNKALTDEAAKLKGTLADIN-LAL---EK------STT-QDPSSVKDQATKLNQKRKQVDQLFLNAKE-EALTKKNLENLRILAENQD-FGLYKATRDEAFNVSD-AVLSHQHQIR-LTAKQELL-TKLST------------DPDKKRAAEVLRGILSKRQLKE----ELT--K-QCALSVEEERQLLIKQVKTARGDIEVLERQVNETRDALSESKNRCASL-DEELKSYSGDNIKAFQELQEKD-RELQSF-DSFP-------------------------------------------------------------------------------------- | |||||||||||||
6 | 6h7wB | 0.16 | 0.09 | 0.55 | 0.47 | MRFsearch | --DDWFHDRRVYLDALENQLKALLKANMVAQRKAMAEAAADFSASLHALSTV--------------------ELSPTLSGPLDALSELQLAIRDVYERQAQQ----------------------DVLTFGIIIEEYIRGSVKQAFSQRQKAFHSWHSAESELMKKKAAQDKLLRQGKTQQDRLNQVNAEVIDAERK-------------------VHQARLLFEDMGRL------LRSELDRFEREKVEDFKS----------GVETFLESAVEAQKELIEKWETFL------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4l3iA | 0.10 | 0.09 | 0.87 | 1.15 | FFAS-3D | ---ESIVCLQKALNHLLQRTEVVKKHIKESLKERLIKSISVCQKELNTLCSE------LHVEPFQEEGETTILQLEKDLRTQVELKQKKERKQELKLLQEQDQELCEILCPHYDIDSASVPSLEELNQFRQHVTTLRE-TKASRREEFVSIKRQIILLSLENIATLQKLLRQLEQKSQNEAVCEGLRTQIRELWDRLQEEEREAVATISGSKAKVRKALQLEVDRLEELKQNKKVIEAIRVELVQYWDQCQEQRQAFAPFCAEDYTESLLQLHDALFEGVQKWEETW-------RLFLEFERKASDPN--------------------------RFTNRGGNLLKEEKQRAKLQK-------LPKLEEELKARIELWE | |||||||||||||
8 | 5j1iA | 0.08 | 0.06 | 0.77 | 0.85 | SPARKS-K | RCISELKDIRLQLEACETRTVHRLARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEVLALSPAAPTLRSELTLLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEKEAQAVPATLPEASLKKLRAQAEAPTFDALRDELRGAQEVGERLQQRHAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLGARQEQIQAMDSQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEKVQSVDLRTHYSELTTLTSQYIKFISET---------------------------------------------------------------------------------------- | |||||||||||||
9 | 3r6nA | 0.13 | 0.11 | 0.84 | 0.94 | CNFpred | VDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLEKSAIYQLEEEYENLLKAS----------------------FERMDHLRQLQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQK-QEAFSIRMSQLEVKEK-ELNKLKQESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYFQF----------------FEEAQSTEAYLKGLQDSI-PLQHLLEQIKELEKEREKILEY------------KRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQGDECILKDNERSKWYVTGP-GGVDMLVPSVGLIIPPPNPLAVDLSCKIEQYYE------AILALWNQLYINMK | |||||||||||||
10 | 6sl2A | 0.05 | 0.03 | 0.60 | 0.67 | DEthreader | ------AMADSELV--WENFSESFKDGKVFCALIHRHRP--D-----------------------------------------LDWETVGEDDRANLE--VDDIVNMPRPD---------------------SV-MT-YVAALYKVFSSNDQVEKAGKRAGNFLDLLRATEGMVHDYEQRAQALNIFIINISAERALRSKLNTAMRNCLIALRKA-FADPANATDAKINEYRTFVTDETSEAPLEE---------------------------------------------FNYEQTSMFEIVYIEAQI------------EASSGVTQMFKFDDGNHD--ILDLEFRSCLSSMGLVYMEND---------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |