Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | APNIDIIGSFFPVWMLCLAIAIALSFVVRVFLVRLKMESEVGPLALFYPCSVIFFTSLMWLIFF |
1 | 4a01A | 0.07 | 0.06 | 0.95 | 1.17 | DEthreader | | V---SCRTGAATNVIFGLALGYKSVIIPIFAIAISIGALVSLLVSGVQIAISASNTGGAWDNAK |
2 | 5ncog | 0.05 | 0.05 | 0.95 | 1.17 | DEthreader | | QGTEMN--SGGALF-ALGIMPYISASIIIQLLTVVPLAEIKGKISQYTRYGTLVLAIFQSIGIA |
3 | 1p49A1 | 0.12 | 0.11 | 0.89 | 1.39 | MUSTER | | ------FTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLH-VPLGVFFSLLFLAALILTLFLGFL |
4 | 6n3tA2 | 0.05 | 0.05 | 0.98 | 1.17 | DEthreader | | LVVVLFFFGTVIAAALPAIIGGLAIAGALGIMRLVATPVHFF-AQPVVTIGLGIAIDYGLFIVS |
5 | 5x3xM | 0.11 | 0.11 | 0.97 | 1.17 | DEthreader | | LPVHAIGWSTLGANAFSMIVGPWVAFGVYKLAGKAGA-SM-AVAVFLAAFLGDLATYVTTSLQL |
6 | 4tq3A | 0.17 | 0.16 | 0.91 | 1.17 | DEthreader | | ALDRVS--PRFWPVMDVICNALAAVLAFYAGLSIGGA-E-V-PI-AIYPAAFFLAATFYIPTAV |
7 | 3eamA | 0.16 | 0.16 | 1.00 | 0.25 | HHpred | | TPYMTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQPASITRASRIAFPVVFLLANIILAFLFF |
8 | 4ezcA1 | 0.08 | 0.06 | 0.75 | 0.45 | DisCoVER | | ---------------WCALNGCVGTVVSTLTALLLSQDRSAITAGLQGYNATLVGILMAIYSN- |
9 | 6btmC | 0.10 | 0.09 | 0.95 | 0.25 | MRFsearch | | ---PGWHTTIFPPYFVAVFSGFAMVNTLLIVMRKVNLEAYITLQHIELMNIIIMITGSIVGVAY |
10 | 2vpyC2 | 0.12 | 0.12 | 1.00 | 0.94 | SPARKS-K | | RPLWNLMAGLFPLTALVLALGLAALVLAGASLLLALLYLFLLLGLGTFAPWAGLLAAAGLRALL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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