>PF17082 (230 residues) MVVGPISNLRDDALKDDTLNHIRKEYLESKKQISNLLSQETNTNEFSRKPYPNSSPIRKF DHFANERPTTIDAKLREQLRTGASDVAIEQSLRTNSDESRNQMIYDDMKVMKRIIDGQQE SIRELRRALEQERYMNSELQRKYNEMERRFDRLEWFINSHDKFQAYQDIRSNTTKKDFSD PIFNNGLKRRWDEYPIRSFEPDTNINRNNRIFSNYDDSTTRLMQITDPHY |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | MVVGPISNLRDDALKDDTLNHIRKEYLESKKQISNLLSQETNTNEFSRKPYPNSSPIRKFDHFANERPTTIDAKLREQLRTGASDVAIEQSLRTNSDESRNQMIYDDMKVMKRIIDGQQESIRELRRALEQERYMNSELQRKYNEMERRFDRLEWFINSHDKFQAYQDIRSNTTKKDFSDPIFNNGLKRRWDEYPIRSFEPDTNINRNNRIFSNYDDSTTRLMQITDPHY | |||||||||||||||||||
1 | 4cgkA | 0.10 | 0.10 | 0.97 | 0.59 | DisCoVER | AQQQAQKQVI-QEQVSAIQANLQAENDRLQAESKKLEGEITELSKISRNQSLEKQARS-AQT-NGAVTSYINTIVNSKSITEAISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKCTGNGAQWATGSTPQVGAIACWNYGHVAVVTAVTTRIQVSESNYAGNRTIGNHRGWFN-PTTTSEGFVTY--- | |||||||||||||
2 | 3ir7A | 0.04 | 0.03 | 0.77 | 0.67 | DEthreader | AGFS-PIPAMSM---F---YC-DLP--PASPQTWG-----------------ALAMGHVMREFHNPSQYFT-DYVRRYTLEQRELQLSLLSQDEIAEVGVRTALV--TTVYDLT--RGINMLICVGGWAH-Y------Q--EK-LRPQTGWQP-AFLRPAVERFSIG-LNTADAAEMILT--LAPETGAALSPTWSGLE-----DEHVSYNAGYTNIPWRT-HAGYYGTV | |||||||||||||
3 | 6ewyA | 0.06 | 0.04 | 0.73 | 0.57 | CEthreader | ANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAAEDDLEVSQRAVKAATYMNGPSVSYLSASSPDEIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALTETRRKFDEQREEVQRLAAERDAAQARLQAARLVAWSSE-------------------------------------------------------------- | |||||||||||||
4 | 6ek7A | 0.06 | 0.06 | 0.94 | 0.63 | EigenThreader | VAGLEPKDIKLLFDEIHNHALNWNDVEQAVLQQSLDLDIAAKNIISTGMPITLRVKTLLGDITDKQLEN-------------ITSADHEVASALKDILDDMKGDINRHQTTTENVRKKVSDYRITLTGEPQVKTKYDLMEKSKSIKELDEKIKEKRQRIEQLKKDYDKFVGLSFTGAIGGIIAMAITGGIFGAKAENARKEKNALISEVAELESKVSSQRALQTALEALS | |||||||||||||
5 | 6wucK | 0.08 | 0.07 | 0.79 | 0.35 | HHpred | -------------NLENQIGNKRYFLKQAQGAIDEITKRSLD-----TEGKPV-------------NS--------EVFTELLRKPMFFSDPIGFS--LTSNFLSLRAQSSSEWLSLMNDQSVDQKAMLLLQNNINSDLKELLRKLQHQMTIMDSKKQDHAHIRTRKARNGYLVPNLDDNDIDSLTNEVMLLMKRLIEHDLN----LTLNDFSSKTIPIYRLLLRAN--- | |||||||||||||
6 | 6gaoA1 | 0.11 | 0.06 | 0.57 | 0.43 | MRFsearch | ------EEIKKQQVNVDDIRAANIKLDGLGRQIADISNSIST-------------------------IESRLGEMDNRLVGIS---------------SQVTQLSNSVSQNTQSISSLGDRINAVEPRVDSLDTVTSNLTGRTSTLEADVGSLRTELAAL---------------------------------------------------TTRVTTEVTRLDGLIN--- | |||||||||||||
7 | 4wheA | 0.14 | 0.07 | 0.53 | 0.79 | FFAS-3D | -VNANINALLEDPQKRLMIQEMEDTLVEVRSTSARALAE--------------------------------KKQLTRRIEQASARQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRARQQALML--------------------------------------------------------------------------- | |||||||||||||
8 | 6yvuA | 0.08 | 0.07 | 0.98 | 0.77 | SPARKS-K | LHKSKLENKENGLLNESRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKKMVQEQLSKQRDLYKRKEELVSTL-----ADGGYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLARLVEYGFDPSRIKDLKQREDKLKSHYYQTCKNSRVTNLEFNYTKPYPNFEASFVHGVVGQLFQIDNDNI | |||||||||||||
9 | 3o1hA | 0.11 | 0.06 | 0.56 | 0.58 | CNFpred | -------------IEARQVSELSTRIISSVQMLSNAQNEQERKEAGRVL--------------------EQLESLLTHIKELGGESFD----------------SKLLDALESNVQNVINNLAELGVTVERKLWLAKEIDTRVEEMRLLSEELEQLTRTQVQNTSTIAVANVTHIYDL---------------------------------------------------- | |||||||||||||
10 | 2dfsA | 0.02 | 0.02 | 0.70 | 0.83 | DEthreader | ---------------------------------IPPKHDPLTIFCLRAKIYLFNVDVN---GVLDIYPHYVRCI-------SRWTQEFSYRVLMKQKLAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHV------------------------K- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |