>PF17061 (296 residues) GWRVQSLPTSAPLSVSLPTNIMPPTTIWTSSPQNTDADTASPSNGTHNNSVLPVTASAPT SLLPKNISVESREEEITSPGSNWEGTNTDPSPPGFSSTSGGVHLTTTLEEHSSGTPEAGV AATLSQSTAEPPTLISPQAPASSPSSLSTSPPEVFSASVTTNHSSTVTSTQPTGAPTAPE SPTEESSSDHTPTSHATAEPVPQEKTPPTTVSGKVMCELIDMETTTTFPRVIMQEVEHAL SSGSIAAITVTVIAVVLLVFGVAAYLKIRHSSYGRLLDDHDYGSWGNYNNPLYDDS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | GWRVQSLPTSAPLSVSLPTNIMPPTTIWTSSPQNTDADTASPSNGTHNNSVLPVTASAPTSLLPKNISVESREEEITSPGSNWEGTNTDPSPPGFSSTSGGVHLTTTLEEHSSGTPEAGVAATLSQSTAEPPTLISPQAPASSPSSLSTSPPEVFSASVTTNHSSTVTSTQPTGAPTAPESPTEESSSDHTPTSHATAEPVPQEKTPPTTVSGKVMCELIDMETTTTFPRVIMQEVEHALSSGSIAAITVTVIAVVLLVFGVAAYLKIRHSSYGRLLDDHDYGSWGNYNNPLYDDS | |||||||||||||||||||
1 | 2fvnA | 0.09 | 0.04 | 0.48 | 0.64 | DisCoVER | -------------SA-EL--HLESRGGSG-------TQLRDG--------AKVATGRIIC--RE--AHT------GFH-V--W----------MNERQVDGRAERYVV-QSKDGRHELRVRTGGDGWS---PVKGEGGKGVSR-------PGQEEQVFFDVMADGNQ--------------------------------------DIAPGEY-RFSVGGA-----------C---V--VPQEDNKQGF-TPS--GT--TG-TTK-LT--V-------------------------- | |||||||||||||
2 | 4gnsB | 0.08 | 0.05 | 0.65 | 0.67 | DEthreader | --YQFLNIVTAIITN---T----------------------------------NPELKLECPFYVSCKKELCRFLPRSL-C----------------------------GWDKSTVNMYLFIITPLVDFTIYLL---YTAITDILTL-------------EY-RI--------KPLNGHY-SLWKEDE--RQWDDAIGPICGSVNLLLTSIRFDCQQLLYPTLLDDTIISLLIKKISYDC-R-Y-YN-YCQ-IFNLQLLEKLCNELGT-HI-LRNKILLQIGDEIMVMIDAMLAA- | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.05 | 0.97 | 0.62 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 5i9dA | 0.04 | 0.04 | 0.86 | 0.72 | EigenThreader | IDGLCKAGKGIKPDVVTYNTLIDGLCKAG---------------------KLDEALKLFIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEK------GIKPNVVTYSTLIDGLCKAGKLDEALKLFEMKGIKPNEEMKGI-------------KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKTYNTLIDGLCKAALKLFEEMVEKGIKPDVVTYNTLIDG | |||||||||||||
5 | 1x6lA | 0.21 | 0.07 | 0.32 | 0.37 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPFFFMGD-KVKRDRFVGSVQTWKFDGVDIDWEFPGGSPVLLMKELRAMLDQGRKYELTSAISA---------GKDKIDKVAYNVAQNSMDYGAFDLHQTALNAPA | |||||||||||||
6 | 2kncB | 0.17 | 0.03 | 0.20 | 0.47 | MRFsearch | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILVVLLSV----------MGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEA | |||||||||||||
7 | 4nl6A | 0.13 | 0.11 | 0.88 | 0.49 | FFAS-3D | GGSGGGVPEQEDSVLFRRGTGSDDSDIWDDTAKAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNAASLQQWDGCIYPATIASIDFKREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIPPPPP-------ICPDSLDD-------ADALGS-------------MLISWYMSGY----HTGYMGFRQNQKEGRCSHSLN------ | |||||||||||||
8 | 4btgA3 | 0.12 | 0.12 | 0.96 | 1.24 | SPARKS-K | ----GFNLKVKDLNGSAR-GLTQAFAIGELKNQLSVGALQLPLQFTRTFSASMTSELLWEAYVYRVGRTATDANAVVSTPKELDPSARLRNTNGIDQQRGRAEVIFSDEELSSTIIPWFIEAMSEVSPLRPINETTSYIGQTSAIDHMGQPSHVV-VYEDWQFAKEITAFTPVK---LANNSNQRFLDVEPGISDRSATLAPIGNT-RGTVNSNGAEMTLGFPSVVRDPMVAIAALRTGIVDESLRA--SNDLKRSMFNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLVWNV | |||||||||||||
9 | 6xiwA | 0.12 | 0.03 | 0.22 | 0.40 | CNFpred | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVK---YGENINRANFSSAGKAITVLFRIV | |||||||||||||
10 | 4bujB | 0.06 | 0.04 | 0.64 | 0.67 | DEthreader | -----------------------SSLPASNNV----------------SSNRNLATVLEYFFHLKLLYNWRVMVKYWTDYLLPLTKREFSLDLTQMGKGI--I---WKD---------T--TQVHESPNNLGLDQAVYIMHATDICTAKYITEYASAHLEKQ-----EESDSIEW----------------------------------------V-DKIQ--PSTIEKVCQAQLVKDTIEILQVLRLFIWIEVFKKSPDSQLLLENFAIIKGSQISESSE----KISNHICLGLS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |