Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MKRLETIRHMWSVVYDHFDIVNGKECCYVHTHLSNQNLIPSTVKTNLYMKTMGSCIQMDSMEALEYLSELKESGGWSPRPEMQEFEYPDGVEDTESIERLVEEFFNRSELQAGESVKFGNSIN |
1 | 4zxaW | 0.09 | 0.08 | 0.88 | 0.83 | DEthreader | | -QLG-AF-E-LSRARAFMMDWGFF-YGWVNFD-----HVIGTRKVDLYAGTKNYTENFETPLIMATFKAILRWTNATFDAEC-PLRFSLFYTSVLFCPEWFCAMPADIRHQGYSSMLMV---- |
2 | 3p23A | 0.07 | 0.06 | 0.80 | 0.83 | DEthreader | | NLLQTVFYYVISESLDCLHPE-------HED---------V-----IAELRPSAVLFWSLEKQLQFFQDVSDR-I-EKEGPIVKLEGRAVVMGGSVRDLLRMLFVCYFTSR--PHLAHTYRAM |
3 | 5yd0A | 0.18 | 0.15 | 0.83 | 3.11 | HHpred | | GLDLTSLRELIPSLQAFIETKQQGDLFYIFVWS---TKPRCSLSSSLYCRSLTSKLPLDSKETFEFLERKKTCVKNDL------------------ESNPAFEIFQSERLEYGQRLPFSESAS |
4 | 5yd0A2 | 0.07 | 0.07 | 0.87 | 1.07 | DisCoVER | | SSSLYCRSLLFSERLEYGQRLASIEFKQFYISAFANTQGGYLLFGVDDLGCPKVDRLKA--VVNEAISKLPVFKEKV----SYKTRVIDVFK---------EGNLYGYLCVIKVERFVFSEA- |
5 | 5yd0A | 0.17 | 0.14 | 0.84 | 1.70 | MRFsearch | | --LETSLRELIPDLQAFIETKQQGDLFYIFVKSWSTKPRICSLSSSLYCRSLTSKLPLDSKETFEFLERKKTCVKND------------------LESNPAFEIFQSERLEYGQRLPFSESAS |
6 | 5yd0A | 0.17 | 0.15 | 0.85 | 1.55 | SPARKS-K | | LDLETSLRELIPSLQAFIETKQQGDLFYIFVKSWSTKPRICSLSSSLYCRSLTSKLPLDSKETFEFLERKKTCVK-------------NDLESNP-----AFEIFQSERLEYGQRLPFSESAS |
7 | 3rf9A | 0.06 | 0.06 | 1.00 | 0.58 | MAPalign | | PFRADQVMKWMYHDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCATAQQGFNRNLSEIIGQVWRAAKITGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG |
8 | 6ioyA1 | 0.13 | 0.11 | 0.89 | 0.48 | CEthreader | | -------------ASKVLVLNCGSSSVKYKLLEMPKGDVLAQGGVLKLTMPNGEKVVLEHTIAVEFILSVLKDDKYGCIKSYEEEKFSNSVEITPEVIAKVEECIPLAPLHNPANLKGVVAIE |
9 | 5yd0A | 0.16 | 0.14 | 0.85 | 1.02 | MUSTER | | LDLETSLRELIPSLQAFIETKQQGDLFYIFVKSWSTKPRICSLSSSLYCRSLTSKLPLDSKETFEFLERKKTCVKNDLESN------------------PAFEIFQSERLEYGQRLPFSESAS |
10 | 5yd0A | 0.18 | 0.15 | 0.82 | 1.20 | FFAS-3D | | ----TSLRELISDLQAFIETKQQGDLFYIFVKSWSTKPRICSLSSSLYCRSLTSKLPLDSKETFEFLERKKTCVK------------------NDLESNPAFEIFQSERLEYGQRLPFSESAS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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