Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | LLKALEKLPLHSKTLDLLACKLKGDELKTVIIPLAKLVSNLESSRAETQRIKALESIIYHTHFVWGSPLPVHLKMFQSHYTDMLMHWPYERHRSILNMEKPRSTSLRYRWEDSSKTVLSMAEYSKNPWIEDNILSKKLTIIQRDLLFHSVFSHYLFLKANPRLCNNGRNLPIPIVEIPMRPLGNDIAVSRIKNLFKSKVAHTYRILAIENPVLSRGSENILSEII |
1 | 1o9iA | 0.05 | 0.03 | 0.59 | 0.59 | DisCoVER | | --------------------------------------------------------QYN--AK-PDRSDPIM---A------RR-LQESLGG--QW--------GET-TG-----MMSFLSQGWASTYKDLLLTGTEE-MAHVEMISTMIGYLLDAPFGPEDLKRDPSLANASLNNPWYVTSSGNLDMRFNESEARLQVSRLY-SMT-EDEGV----RDMLKFL- |
2 | 6cfwH | 0.07 | 0.05 | 0.70 | 0.83 | DEthreader | | ---------ATGDIFNFYVLGIALVAKVALALFIGGLLFKSGWLSLSGLVKIGIYAIARIVFIFSTINLMVAYGVGEIALA-GA-IYHTVNHALMKALLFLATTAFLIGA-------AAIVGLPPLNGFA-KWYEAGAVIGTVF--------------------------------ILVV-TIIVMGFF-PWQISDRIMVPTARALWDVI--------------- |
3 | 4k6jA | 0.06 | 0.05 | 0.96 | 0.51 | CEthreader | | AMETLLSLTSKRAGDWFKEELRLLGGLDHIVDKVKECVDHLSRDEDEEKLVASLWGAERCLRVLE-----SVTVHNPENQSYLIAYKDSQLIVSSAKALQHCEELIQQYNRAEDSICLADSKPLPHQNVTN--HVGKAVEDCMRAIIGVLLNLTNDNEWGSTKTGEQDGLIGTALNC-VLQVPKYLPQEQRFDIRVLGLGLLINLVEYSARNRHCLVNMETSCQV |
4 | 2q80A | 0.06 | 0.05 | 0.84 | 0.62 | EigenThreader | | MLHNASLLIDDIEDNFLGLEKVLTLDAVKLFTRQLLELHQGQGLDEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTLGLFFQIRDDYANLHSKSFCEDLTEGKF--SFPTIHAIWSRPESTQVQNILRQRTENIDIKKYCVH-----------------------------YLEDVGSFEYTRNTLKELEAKAYKQIDAR-----GGNPELVALVKHLS |
5 | 1vt4I3 | 0.09 | 0.05 | 0.58 | 0.36 | HHpred | | ----------------------------EYA-LHRSIVDHY----NIP------------KTFDSDDLIPPYLDQY-------------FYSHIGHHLKNIEHPER-MTLFRMVFLDFRLEQKIRHDSTAWNASGSILNTDNDPKYERLVNAILDFLPKIEEICSK----------------------------------YTDLLRIALMAEDEAIFEEAHKQV- |
6 | 2r02A2 | 0.11 | 0.10 | 0.87 | 0.57 | MRFsearch | | --AAIEDVSVPQSILTKSRSVIEQGGIQTVDQLIKELPELLQRLRLLDEEEATDNDLRAKFKERWQRTSNELYKPLRAEGTNFRTVLDKA---------VQADGQVKECYQSHREPELNAAI------PSANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLKS------------NEEALSVTELDRVYGGLTTKVQESLKKQEGNEANLREEVLKNLA |
7 | 4mu6A | 0.14 | 0.13 | 0.89 | 0.75 | FFAS-3D | | -LKDLSKAPI-PWIHSSVTATLKTEVKKNLEQQSYKAQLAEDKIQKEQDDAEALDKKLKEVLTRELNHIPTQISEQQTELRLLHYKLEEIKIQSLFEQEVNNKIKLNEIEKRASVRSQHHTKRVKRAQATGEDILSTLSGKNQSILLRSIQKQHHALEKKCS----------------------DLIQEADQINYPLFLEELQKYLNKKKHTLSSQEVDALKSVI |
8 | 6w2rA | 0.08 | 0.07 | 0.84 | 0.69 | SPARKS-K | | AIEAAREGNTDREQLQRALEIARESGTKTAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAESNNSDALEQALRVLEEIAKAVLKSEVKLVQEAYKAAQRAIEAAKRTGTPDVIKLAIKLAKLAARAALEVKRPKSEEVNEALKKIVKAIQEAVESLREAEES---------------GDPEKREKARERVREAVERAEEV-------------------- |
9 | 7jh5A | 0.11 | 0.10 | 0.90 | 0.73 | CNFpred | | LLEAIARL--QELNLELVYLAVELTDPKRIRDEIKEVKDKSKEI-EIDDAAKESEKILEEAREAISGSGSELAKLLLKAIAETQDL-NLRAAKAFLEA--------AAKLQELNIRAVELLV--KLTDPATIREALEHAKRRSKEIIDEAERAIRAAKESERIIEEARRLI-------GSEL-ARELLRAHAQLQRLNLELLRELLRALA-QLQELNLDLLRLAS |
10 | 1s5jA | 0.10 | 0.07 | 0.72 | 0.83 | DEthreader | | ------DIGLIYVLESV-YLSLDEKDVEEIKFS-EMTRQM------------A---DW-LPIFET--EIPKI--KR---V--AI--DIEVYT-RIPDSQKA--------------------EFPIISLLLGRFFDIPIDVAGKDEAKHIDYKFFFNKAVRNYAFE-GKYNEYNLDAKVDTLISFLKLIEYNFRDAEITLQLTTDLTMKLIVLFSRGIE-LT---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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