>PF17045 (265 residues) LTSCEAELQELMKQIDIMVAHKKAEWEGQTQALEACLGVREQELSSARAALEEKHKEVGK LRQQLEDMEAAKQDLVREYEQQLKKFQEELARLRRSYEKLQKKQLREAREEATKRQGDDQ CEMSRLSRKLEEFRQKSLDWEKQRLLYQQQVASLEAQRKALAEQSELIQQTQLASRKQIL ESVELASRSEIQHLTSKLERANDTICANELEVERLNMRVDDLTENNRMILEDQQRVAEEL RQSKKMLEVLQDEKMELRATLQSQE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | LTSCEAELQELMKQIDIMVAHKKAEWEGQTQALEACLGVREQELSSARAALEEKHKEVGKLRQQLEDMEAAKQDLVREYEQQLKKFQEELARLRRSYEKLQKKQLREAREEATKRQGDDQCEMSRLSRKLEEFRQKSLDWEKQRLLYQQQVASLEAQRKALAEQSELIQQTQLASRKQILESVELASRSEIQHLTSKLERANDTICANELEVERLNMRVDDLTENNRMILEDQQRVAEELRQSKKMLEVLQDEKMELRATLQSQE | |||||||||||||||||||
1 | 2tmaA | 0.14 | 0.14 | 0.99 | 1.81 | FFAS-3D | MDAIKKKMQMLKLDKE-NALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAATDAEADVASLNRRIQLVEEELDRAQEATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKA-- | |||||||||||||
2 | 6yvuB | 0.11 | 0.11 | 1.00 | 1.27 | SPARKS-K | FLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVLERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISENMLEELRGQQTEHETEIKDLTQLLEKERSILDDIKLEIIRHEKELEESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEARSSLSKAQ | |||||||||||||
3 | 2tmaA | 0.13 | 0.13 | 0.97 | 1.08 | CNFpred | MQMLKLDKENALDRAEQ-AEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAVASLNRRIQLVEEELDRAQERLATALQKLEEAEK------ADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIELERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAIS | |||||||||||||
4 | 5nnvA | 0.13 | 0.11 | 0.86 | 1.04 | MUSTER | -------------------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELS--KQEAVFETLQAEVKQLRAQVKEKQQ----LSNELTELKIAAAKKEQACKGEEDNLAR-LKKELTETELALKEAKEDLSFLTSESS-----STSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTT | |||||||||||||
5 | 6z47G | 0.16 | 0.15 | 0.95 | 1.62 | FFAS-3D | ----QREIESLTQQFE-EKAASYDKLEKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISSKY----ADERDRAEAEAREKETKALSLARAEALEAKEELERTNKMLKAEMEDLVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAQFERDLQARDEQNEEKRRQLLKQLHEHETELEDERKQRALAAAAKKKLEVDVKDLESQVDSVNKAREEAIKQLRKLQAQM---- | |||||||||||||
6 | 6yvuA | 0.08 | 0.08 | 1.00 | 1.27 | SPARKS-K | REKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKEKELHKSKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTGYNAQLAKAKTELNEVSLAIKKSSMKMELLKKELLTIEPKLKEATKDNELNVKHVKQCQETCDKLR | |||||||||||||
7 | 5j1iA | 0.11 | 0.11 | 0.93 | 1.00 | CNFpred | --TLRSELELTLGKLEQVRSLSYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQ-TLPELEATKASLKKLRA-QAEAQQPTFDALRDELRGAQEVGERLQQRHGE------------RDVEVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLG-AWLQDARRRQEQIQAM-SQAVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYK-GSESVIQEYVDLRTHYSELTTLTSQYI | |||||||||||||
8 | 5xg2A | 0.19 | 0.16 | 0.86 | 1.55 | FFAS-3D | -------------------KGAIVRWGKRKEKLIEEIRAREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLEARIKRAEEEKERLKAEIL------------TGEARLPGLRERAENLRRLVEEKRAEISELERRLSSITSQSFELRIKLSDLEKELELARKDL-----EKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKEARELTEKIRAVEKEIAALREELSRVEGKLEG-- | |||||||||||||
9 | 3i9wA | 0.11 | 0.11 | 0.96 | 1.09 | SPARKS-K | TMNMARQLSEASAWELFAAQNLTSMWQAQGRMLTAQSLKINALLQALRTAIEQQEQEISRSLRQQGELVGQRLQLRQQQQQLSQQIVAAADEIARLAQGQANNATTSAGATQAGIYDLIEQDQR---------QAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVMNLGLEQIQKNAPTLEKQLNNAVKILQRRQIRIEDPGVRAATTLTTVSQ-YSDLLALYQQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRN | |||||||||||||
10 | 5xg2A | 0.15 | 0.13 | 0.86 | 1.00 | CNFpred | --RWGKRKEKLIEEIRA-REEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEGEARIKRAE----EEKERLKAEILTGEARLPGLRERAENLRR-------------------LVEEKRAEISELERRLSSIT-------SQSFELRIKLSDLEKELELARLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALENP--EARELTEKIRAVEKEIAALREELSRVEGKLEGL- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |