Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TLAILYATYTIGPHLEGFSFNHLSHMPISKSRELFLRVFVSISGNVYNDDEVFTTPPAFEFGAAQGNVRICQQGKKLLVRSLSEQFYREAPDWHPYRRVPGSPWNNFIRNTELPVFSTNENPTPHAKTKYILPYNAMVLAGQFKAKYNLVRA |
1 | 1iru1 | 0.06 | 0.04 | 0.67 | 0.70 | DisCoVER | | FNGGTIL--AI-AG-EDFAI--V-----------A--SDT-RLS--E-GFSIH--TRDSPKCYKDKTVIGCSGFYNIIGGLDEEGKGAVYSFKAGVKVFIDVYT-GDAL----RIC-----------IVTKEGIREETV------SL--RK- |
2 | 3pvrA | 0.04 | 0.03 | 0.78 | 0.83 | DEthreader | | AHSEIVGMLPEGNWITRAPTLRRKAILL-AKVQDEAGHGLYLYSAAETGCAREDIYKMGRMKY----SSI-------FNYP---TLSDVIGWVDAIVQVALTYA--M--MFGPNLRRFNTQVLGM-----CERDAKRKAWGT--R------- |
3 | 6dg4A | 0.09 | 0.09 | 1.00 | 0.46 | CEthreader | | ELAKTLEGQPLVRRDFEEKLLPATAWLNDNVIIGAIFYIADYVNTKKGAPNQEPKCTAFTSDIDTILIPICESSHWTLAVIRPGRRTVSHLDSMAAGRGSERVKAKLLELVKFVLEDQFVEAEWQAVDFQAPRQTNGWDCGVFTITNAICLA |
4 | 6l7dA | 0.06 | 0.05 | 0.93 | 0.57 | EigenThreader | | ADDQRLVDQALVDLDGTPDKSR---LGGNAILGVSLAVAKAAADSAE----LPLFRYVGGPNAVPMMNILNGGAHEFMVAPIDVALALDAAATEFPLSEDDWDGWAALTASIGDRVDIFVTNVNQIGT---LTETLDAVTLAHHGADLAVAI |
5 | 6ewnA | 0.10 | 0.06 | 0.57 | 0.23 | HHpred | | -------------------------------------------EETPEALLLKVELPG----MDPKDIDVQVTAEAVSISG-ERKSETKTETEGMK--RTEFRYGKFQRVIPLPVRIQNTSVKADGILHLTLPKAEE--------------- |
6 | 6cb0A | 0.12 | 0.09 | 0.72 | 0.55 | MRFsearch | | --ALKLGCLEIRRSYGEMRGNALEKKNREESILKFFEILSPVYRFDKECFKCALWIISVELAIGEEGISYLTDKGMLQLKIAG----------------------------------------APEPLTVTAPTIAENMADLIDGYCRLVN- |
7 | 6d2kA | 0.08 | 0.07 | 0.85 | 0.49 | FFAS-3D | | -TAALLISHLLQSEIGDYDHQRHTGQTPAESDFQVLEIARKL----------------EMYGIRFHMAS-DREGTKINLAVSHM----GVLVFQGTTKINTFNWSKVLSFKRKRKLHPEVHGPYQDTLEFLLGSECKNFWKICVEYHTFFR- |
8 | 4jmfB | 0.12 | 0.09 | 0.68 | 0.71 | SPARKS-K | | ---------------------------MNPLYRAAIHQLFLALDTPNDEESV--------LSLQVGLCHLAETDHLLMFTRLEGQGDATANEQ-----------NLFSQDPCKPILGRDP-ESGERLLWNRQPAQIHHQLEQLVAAAEELR- |
9 | 2ordA | 0.08 | 0.06 | 0.70 | 0.62 | CNFpred | | NPLACRAGVTVIKELTKGFLEEVE-----EKGNYLMKKLQEMKEEY------------------DVVADVRGMGLMIGIQFREEVSN--------------REVATKCFENKLLVVPAG-----NNTIRFLPPL-IDLAVETLKKVLQGI-- |
10 | 1xmeA | 0.08 | 0.07 | 0.81 | 0.83 | DEthreader | | --------WVSIYIVLDLWWPVTYMAVV-FWLMWFLASLGLVLEAVLFWEGVDPLVA-RTLFWWTGHPIYWLLPA---------------FGGGGIVNALVVAWVPGHFHLVASLVTTAGSLLLLL----IGFAVAAILVVLYGPTLVQLFG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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