Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | MKKGVSRTPKKQSRVVSKSKNRKKKENSKEQENLQIQEPAHCEEKEINEKAHTKTVVMKEYMENETQQNGVMCSECRNYTDVKLELVTQLQEENRMLREEIQHLLSTMNMLGITSHASGDTQVWGFHREGSKGNIGLEFEIKDSGNNYTVQITSTHNCDVPEYMYKGIEFKKKSFILFFYKLMQIICEN |
1 | 3n4xA | 0.13 | 0.05 | 0.42 | 1.06 | DisCoVER | | ----------------------------------------------------------------------------------------------------KDLYEYLCNVRVHKSYEDDSGLWFDISQGT---HIMDYKLGFVV-TEVIYAPVLKQSLKLPEYLFETLSFPLSSLNQFYNKI---A--- |
2 | 3n4xA | 0.13 | 0.08 | 0.61 | 1.27 | HHpred | | ---------------------------------------------------------------------LLVANLVNENFVLSATEIKQLQKQIDSLNAQVEVKDLYEYLCNVRVHKSYDDSGLWFDISQGTH--IMDYKLGFVVTEVIYAPVLKQRQKLPEYLFETLSFPLSSLNQFYNKIAKSL--- |
3 | 3n4xA | 0.12 | 0.08 | 0.72 | 1.22 | MRFsearch | | ------------DLLVANLV---------------------NENFVLSEKLDTKATEI--------------KQLQKQIDSLNAQVKELKTQTSQQAENSEVIKDLYEYLCNVRVHKSYEDSGLWFDISQG--THIMDYKLGFVVTEVIYAPVLSLQSKLPEYLFETLSFPLSSLNQFYNKIAKSL--- |
4 | 1tubA | 0.03 | 0.03 | 0.92 | 0.83 | DEthreader | | --GQGVQIGNACFVDLETAANNYARGHYIGKEIIDLV--R---KLA--LQGFSVFHSFGSSIYPQVST-DNILNLIGQIVSSITASLRFDLNVDTEFQTNLVPYRGHFPLATYAPLSV-AEITNAFPQKCDPRHGKYCL-YVVPK-DVNIAIKTKRTIQFVWCPTGFKVGINYEPPRAVCMLSN-AI-W |
5 | 3n4xA | 0.11 | 0.08 | 0.74 | 0.80 | CEthreader | | ------------------------------------------SADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTSQQAENSEVIKDLYEYLCNVRVHKSYEDDSGLWFDISQGTHI----MDYKLGFVVTEVIYAPVLSLQSKLPEYLFETLSFPLSSLNQFYNKIAKSL--- |
6 | 3n4xA | 0.09 | 0.06 | 0.72 | 0.80 | EigenThreader | | -------------------------------------SADLLVANLVNENFVLSEKLDTKATEIKQ--------LQKQIDSLNAQVKELKTQTSQQAENSEVIKDLYEYLCNVRVHKSDGLWFDISQG-----THIMDYKLGFVVTEVIYAPVLSLQSKLPEYLFETLSFPLSSLNQFYNKIAKSL--- |
7 | 6mjbA | 0.12 | 0.06 | 0.47 | 1.24 | HHpred | | ---------------------------------------------------------------------------------------------------IEIIKDLFEHLCGVRVHRTYDDTGLWFDTSQGSKNGIMDYKLGFVDTEVIYVPLLKQRLKLPDYLFETLSFPLRSLNQFYIKMSKSLNK- |
8 | 6mjbA | 0.11 | 0.05 | 0.48 | 0.78 | MRFsearch | | --------------------------------------------------------------------------------------------------TIEIIKDLFEHLCGVRVHRTYEDTGLWFDTSQGSKNGIMDYKLGFVDTEVIYVPLLELQKKLPDYLFETLSFPLRSLNQFYIKMSKSLNK- |
9 | 3n4xA | 0.11 | 0.08 | 0.72 | 0.67 | FFAS-3D | | --------------------SADLLVANLVNENFVL-------SEKLDTKATEIKQLQKQI------------DSLNAQVKELKTQTSQQAENSEVIKDLYEYLC------NVRVYEDDSGLWFDISQGTHI----MDYKLGFVVTEVIYAPVLKQRSTLPEYLFETLSFPLSSLNQFYNKIAKSL--- |
10 | 3n4xA | 0.06 | 0.04 | 0.72 | 0.85 | SPARKS-K | | ---------------------------------------------SADLLVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTSQQAENSEVIKDLYEYLCNVRVYEDDSGLWFDISQGTHI----MDYKLGFVVTEVIYAPVLKQRSKLPEYLFETLSFPLSSLNQFYNKIAKSL--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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