Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | INLIFPFDVPGVANKVALSVTTHIKGEIVSFALPFRLLFLTKPPNNSHPYSIKVKKNGDMFVYVLKFESIDLKRFLEKWELHVLKEVAEEYEEIMKEMDEKMEEYEQREKTGKKRKIVDDDGWVRY |
1 | 4r4gA1 | 0.08 | 0.06 | 0.80 | 0.59 | DisCoVER | | ETEKSSDIA--QVKIKDVSYTLPKSTSDDQLVLKVNVAVKNTGKDPLNVDSDFTLYQGDTKSDTDKLQGST--IN--ADKSVEGN--L--F--FV--VD--KG--------KQYELNYPKSVTFK- |
2 | 6nbqB | 0.04 | 0.03 | 0.81 | 0.83 | DEthreader | | ----F-LISALTGMAG-------------------IFALLSASLLTGAYGSSAFYGLLGLVALFAGFFQWTPYVLSVGSAGLAFLAFPSVTDQWQLIFTVLAILSMILGNASGQGFVMLFLLYLGL |
3 | 2dmbA | 0.09 | 0.08 | 0.89 | 0.51 | CEthreader | | ----GSSGSSGTGDASKCLATGPGIASEVGFVVDAKVTCTVLTPDGTEAEADVIENEDGTYDIFYTA------AKPGTYVIYVRFGGVDIPNSPFTVMATDGEVTAVEEAPVNACPSGPSSG---- |
4 | 5vmmE | 0.10 | 0.09 | 0.91 | 0.67 | EigenThreader | | NSRIDFEMKEQQSVKP---ARVIFTKPEIELGLQSRKFEVYEGDKKL-PIKLVSYDTVKDYAYIRFSVSNGT------KAVKIVSSTHFNLERQVYELNKIQSMMDTFVKHPIKTGMLN-GKKYMV |
5 | 5wyjCA | 0.18 | 0.17 | 0.98 | 0.57 | HHpred | | --IVVPFKLPDHKSLHFMFAKRHQSSCLFLVNLPLLSNICGKYDTVSHVEELLYNTSPRNTAL-LKFVDAASINCWNALKFTPSFYKPLDIDYLKEDIHTHMAIFEQREAQAQQSSIVDEDGFTLV |
6 | 5y6fA | 0.04 | 0.03 | 0.72 | 0.47 | MRFsearch | | --YFCQTKLA-DNSTLRFRLYDLSL-GGMGALLFAQIEVNMGQVFHFDAQLISISERITTPRLSFRFLNVS----------------PTVERQLQRIIFSLEREAREKADK--------------- |
7 | 5y6fA2 | 0.05 | 0.04 | 0.74 | 0.50 | FFAS-3D | | PPYFCQTKLADNSTLRFRLYDL--SLGGMGALLAEQIEVNMGQWGVFHFDAISISERITTPRLSFRFLNVS--------------------PTVERQLQRIIFSLEREAREKADK----------- |
8 | 2joeA | 0.11 | 0.10 | 0.91 | 0.77 | SPARKS-K | | ESKKFSANLNG---TEIAITYVYKGDKVLKQSSETKIQFLSAKYKNIAGVEEKLTYTDTYAQENVTIDKVDFKALQGISGI-------NVSAEDAKKGIT-MAQMELVMKAAGFKEVKLEHHHHHH |
9 | 4rehA | 0.14 | 0.10 | 0.73 | 0.62 | CNFpred | | SVVIWNYSIDGNAMIAKEEIVAIDEDKSVTFKVVEGHLFEEF---KSIVFSVHVDTKDNLVTWSIDYEKLNE-------------KDPTSYLDFLLSVTRDIEAHHLP------------------ |
10 | 1w8xB | 0.07 | 0.06 | 0.83 | 0.83 | DEthreader | | ETQ----------SVFDV-------VKGFLVKVTALVRVIYYDPDNQRHTETLHFFIDLTMYYWVPLGAVLANVPQSKQRLKLEFANNNTAPLEA-N--QAVFD-YLSQRDTRKWQTRITDFVYCD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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