Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | REPISMRTYLSLIIESFNKKSDFVLAIVIPAETAVKECADDNIPASIVGKGMVYLAECINLHRFHVSISNPNVIAVSRKNVVDPNVKCHIKTIYYYALGYSAFAEILNKKDKKLFKSLSRVQEDSPAAVAELAGMNPLILTCSWVGTEDDYLNNSIFHTYLEKNKILGY |
1 | 1bouB | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | | --IPALGAAISWVFKGYQ-PIRWI-LVYNFAIGCAETFKPADVMQMDV-D-HGCTVPLMIFGEP--------------EEWPC-KVIVH-VWGTGGMS--------GLINKEFDLNFIDKLISDPEELSKMPHYGVELMWIMR-----ALP-KVR-DLYTFPRKVMSGH |
2 | 1llaA | 0.05 | 0.05 | 0.88 | 0.48 | CEthreader | | HLDHEPFSYAVNVQNNSASDKHATVRIFLAPKYDELGNEIKADELRRTAIELDKFKTDLHKNTVVRHSLDSSVTLSHQPTFEDLNIKGMEYHLFVMLTDWDKDKVSVACVDAVSYCGARDHKYPIHTEHISDFLTNNMFIKDIKIKFHE-------------------- |
3 | 3gnqA2 | 0.07 | 0.07 | 0.91 | 0.73 | EigenThreader | | VYGVNHTNCLAPLVKPLNDKIGLGLMTTIHAYQVLTDVYHEDLRRARSATIPTKT--------GAALPELNGKLDGYAIR---VPTINVSIVDLSFIAKRDTTAAEVNAIMKEASEGGYNEAPLVSIDFNTFDATRLVKVSSWYDNE--WGFSNRMLDTAIALANAK-- |
4 | 2oq8A | 0.24 | 0.17 | 0.69 | 0.37 | HHpred | | ---------------SV-KKRWFV----KPFR-------HD----R-QLGKLHYKGNYIKFGLYVLKNQDYARFEIAWVHV-DKDGKIEERTVYSIETYWHIFIDIEND-------------LNCPYVLAKFIEMRPEFHKTAWVEE-SNYSEES-IKRYLERK----- |
5 | 1lvwA | 0.18 | 0.14 | 0.74 | 0.55 | MRFsearch | | -EPRGIADAFIVGKDFIG-DSKVALVLG---------------------DGAVIFGYYVPFGVVEFDS-EGRVISIEEKPS-RPKSNYVVPGLYFYD--------------NQVVEIARRIELEITSVNEEYLRMGKLRVELMWLDTHDGLLEASSFIETIQKR----- |
6 | 3pnnA | 0.08 | 0.08 | 0.92 | 0.39 | FFAS-3D | | -DDFYGRNGFEVLARKLTLEGKQGEYCV------GYRVGNTLSESGGVSRGVCQVDEKHLLTGVGIERTDGTISFRDETGKICTLAEDAPVSNWGF---TPDYFDYSEELFINFLNAHGQEPKSEPFVVNDLIRSGRASVEVLDVTYSDDRPGVAKLRELTEAGE---- |
7 | 4gkpA | 0.11 | 0.09 | 0.89 | 0.58 | SPARKS-K | | QNKDLFKDLHVYIDFCLKRRENFNLFSVGSSNIPNFEKLLAFFKNNY-FDKFVITLQYVMLLKIEISLGSTLITQFFCLQ--DIEPIPI--DFYFIEIYQPSIYPILKRS-SPLEIVLKKIFHDT---------KSAFVFQID---HSAEVYDILKLSSHLSFIRNPK- |
8 | 3b7oA | 0.09 | 0.08 | 0.89 | 0.68 | CNFpred | | ---NTVNDFWRMVFQE---NSRVIVMTTKEVERGKSKCVK-YWPDE----YALKEYGVMRVRNVKESAADYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVP----SDPGGVLDFLEEVH----HKQESIMDAGPVVVHCSAIGRTGTFIVIDILIDIIREKGVDCD |
9 | 1sngA | 0.06 | 0.05 | 0.75 | 0.67 | DEthreader | | --DLEFALHLHRRLAEAVPDGEVIWSSVDAVTDSPDLASRTVLMHDRPDS--------------GMIRELLLTNALWAKARWHAHDELAV-----PHQ-L--VEVLAEAGVRTLFT--ASAD-LS-GIS--YV-DTVIHQARLRVDE-RFSVDRPFHI--S-------- |
10 | 2oq8A | 0.23 | 0.19 | 0.81 | 0.42 | MUSTER | | -SVVE---Y---EVVSKNLTSKMSHELLF----SVKKRVKPFRHDRQLGKLHYKLGNYIKFGLYVLKNQDYARFEIAWVHV-DKDGKIEERTVYSIETYWHIFIDIEN-------------DLNCPYVLAKFIEMRP---KTAWVIAEDDIQMVESIKRYLER-KI--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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