>PF17009 (195 residues) MAEPNTEKVKEKAAEVKDTVKEKSDKAEQKVKESVKKAEKGKVGQHIPTSLDNLTFKDII KCTLLLNAIMTIGLYVIVSATRINIGSRWREILLTTAKFMILIFGVGGIVIDAIFFFGRL FSLFKVFLGLKAVKLLGVLIFCFAQKLGAWYIIVMSIVYLASCVLIDLCFVYYLAIFQER LESGEYDENGMPKTK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MAEPNTEKVKEKAAEVKDTVKEKSDKAEQKVKESVKKAEKGKVGQHIPTSLDNLTFKDIIKCTLLLNAIMTIGLYVIVSATRINIGSRWREILLTTAKFMILIFGVGGIVIDAIFFFGRLFSLFKVFLGLKAVKLLGVLIFCFAQKLGAWYIIVMSIVYLASCVLIDLCFVYYLAIFQERLESGEYDENGMPKTK | |||||||||||||||||||
1 | 1eq1A | 0.11 | 0.08 | 0.75 | 0.71 | DisCoVER | -----------AFEEMEKHAKEFQ-KT---F---S------EQFNSLVNSDFNKALKDGSDSVLQQLSAFSSSLQ-GAISDA--NG-KAKE-ALEQARQNVEKTAEELRKAHPDVEKEA-NAFKDKLQAAVQTTVQESQKLAKEVETNKKL-APKIKQAYDDFVKHAEEV-QK----------------LHAAT- | |||||||||||||
2 | 6hydA | 0.05 | 0.05 | 0.86 | 1.00 | DEthreader | --KFDKVRLLQM-AEFDNLIRYITSTIFSQMEYYKNLL-ALDLA--------KSLEELGEAWITFGTGLLLLFVPDPYDPAIHVRTGMSIDSLFDEWMAFLSSMSSRQIKELV-SSYKCNDQSDRRLEML-QQNSAHFLNRLESGYSK-FAD--LNDILAGYIYSINFGFD-LLKLQKSKDRASQR--------- | |||||||||||||
3 | 1eq1A | 0.06 | 0.05 | 0.83 | 0.56 | CEthreader | ---------------DAPAGGNAFEEMEKHAKEFQKTFSEQ-FNSLVNSKNTQDFNKALKDGSDSVLQQLSAFSSSLQGAI--SDANGKAKEALEQARQNVEKTAEELRKAHPDVEKE-ANAFKDKLQAAVQTTVQESQKLAKEVAETNKKLAPKIKQAYDDFVKHAEEVQKKLHEAATKQ-------------- | |||||||||||||
4 | 1sj8A | 0.04 | 0.04 | 0.82 | 0.77 | EigenThreader | EGGNGRPLLQAAKGLAGAVSELLRSAQP----ANLLQAAGNVGQASGELLQQIGESDVLMQLANAVASAAAALVLKAKSVAQRTE-----DQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLVEAGRLVAKAVEGCVSASQAALLRGVGAAATAVTQALNELL--------------------------- | |||||||||||||
5 | 5tj5A | 0.12 | 0.09 | 0.72 | 0.32 | HHpred | -------------------------------------------GGGGAQEINAGLPTIVT-FPFMFALMTLAALSLVLNEKKINKMGEIFDMAF-TGRYIILLMGVFSMYTGF-LYFSNSYKM-KLSILMGFIHMTYSYFFSLANHLDIIGNFIPGLLFMQGIF----GYLS-VCIVYKWAVDWVKDGKPAPG-- | |||||||||||||
6 | 6co7A3 | 0.11 | 0.10 | 0.90 | 0.48 | MRFsearch | ---PDEQHERQAAEREHQKSLNQDDSMEVIMRDRIMHFYSAP------------FSKFVGNVVGYLAFIFLYAYVVLFNFPIKDKVSVYFSDTWNFVDIFSLTVFIIAIILRIILSLDIIFFIVRSLQIFSVNRLLGPKLVMIQKMMQDLAQFIIILAVFTIAYGISVVQYPYWQMYLDEIQGEKPKEFG----- | |||||||||||||
7 | 7ad3B | 0.08 | 0.08 | 0.95 | 0.93 | FFAS-3D | -IYGNGSTITFDELQGLVNSTVTQAIMFGVRCGAAALT---LIVMWMTSRSRKTPIFIINQVSLFLIILHSALYFKYLLSNYSSVTYALVYGATNIIQVLLVASIETSLVFQIKVIIGLMLTSISFTLGIATVTMYFVSAVKGMIVTYNKYFNASTILLASSINFMSFVLVVKLILAIRSRRFLGLKQFD----- | |||||||||||||
8 | 6w2vA | 0.11 | 0.11 | 0.98 | 0.86 | SPARKS-K | --ATDKEEVIEIVKELAELAKQSPNLVAEVVRALTEVAKTST-DTELIREIIKVLLELASKAVLEALQAVAELARELAEKTGDPIAKECAEAVSAAAEAVKKAADLLKRAAQAALELAKAAAEAVLIACLLALDDIAKKCIKAASEAAEEASKAAEEAQRQKARDEIKEASQKAEEVKERCERAQEHPNAGWLEH | |||||||||||||
9 | 3rkoC | 0.12 | 0.09 | 0.74 | 0.88 | CNFpred | --------------------------MLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLP--------LFPNASAEFAPIAMWLGVIGIFYGAWMAFA--QTDIKRLIAYTSVSHMGFVLIAIYTGS--QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHT------------ | |||||||||||||
10 | 2lemA | 0.08 | 0.06 | 0.71 | 1.00 | DEthreader | --------------------------------------------------KVKDFANVYVDAVKDSGRDYVSQFESSSLGQQLSTVSQLQERLGPLTRDFWDNLEKETDWVRQEMDEVEFQKKWKEDVELYRQKASPGAELQEARQAFRDRMRTHVDSLRTQLAPHSEQMRESLAQRLAELKSNPT-KAR----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |