>PF16928 (217 residues) GFLAGIGAQNENAPKARDINATLGLIRENNDLARSGANNVALTGLRGLAGVADIYNQEQQ QKALNAFNQVHANAWATGDPSGLFKFAQENPAFVAQAQQAFSGLNEQQRNDMGDLAMKAN VALSQGPEAYSKFITDNKDRLNRVGANPDWMIQTGVQNPEQLSHMLTTMSLGALGPEKAF AVQDKMVGREIDRGRLAETIRSNKAGEGLQARGQNIT |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | GFLAGIGAQNENAPKARDINATLGLIRENNDLARSGANNVALTGLRGLAGVADIYNQEQQQKALNAFNQVHANAWATGDPSGLFKFAQENPAFVAQAQQAFSGLNEQQRNDMGDLAMKANVALSQGPEAYSKFITDNKDRLNRVGANPDWMIQTGVQNPEQLSHMLTTMSLGALGPEKAFAVQDKMVGREIDRGRLAETIRSNKAGEGLQARGQNIT | |||||||||||||||||||
1 | 5ic0A1 | 0.07 | 0.05 | 0.67 | 0.70 | DisCoVER | APGQKECDALRQLVSVMENSKVLMTGISQNAKNGLPEFGDAIATASKALCGFT-EA--------------AAQAAYLVGVS-DPNSQAGQQVPA-QISPEGRAA----ME-PIVISAKTMLESAGGLIQTARAL---------AVNPRDPPRWSVLAGHSRTVSDSIKKLITSMKA----------------------------------------- | |||||||||||||
2 | 4fgvA | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | ---YDMLQMYIILKLVETFVEK-AEDLQ----A------VRSQMIPGLLDMIVIMVFFNLLRAVDSCMWSLQDVFFVLTDDHKAGFKT-Q--SM--LLMRLFYF--HPADG----------------------------A-PKIQGPI-YQPDQAQPGFLANFVGTLLVCFLNYFRVVLRDFLISLREFA-GDNAELYQVEKEQQEREARAADLERR | |||||||||||||
3 | 3s84A | 0.07 | 0.07 | 0.95 | 0.61 | CEthreader | ---DSEKLKEEIGKELEELRARLLPHANEVSQKIGDNLRELQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRMERVL-RENADSLQASLRPHADELKAKIDQNVEELKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDT------QEKLNHQLEGLTFQMKKNAEELKARISASAEELRQRLAPLAEDVRGNLRGNTEGLQKSLAELGGHLDQQV | |||||||||||||
4 | 6swy8 | 0.03 | 0.03 | 0.82 | 0.63 | EigenThreader | ---------FTYGKTKEEWKEQVAKYS--AMGELYAPIEPT------------------------LPRLLLNYFVSMAYEDSSIRMAKELGKDIAVFNDLYKIKERFHIKHLIKLKLLLLNLIEMIRNLIQYSQNKLAIKASS-SVKKMQELELAMTLLLFNLYLRSKIADLVN---EKLLKFIHPRIQFEISNNNYSSEFRLTQIMKLWCWCENQL | |||||||||||||
5 | 6gmhQ | 0.13 | 0.11 | 0.83 | 0.36 | HHpred | ---GGGGGGGGGVEAMEDYDQAFQYYYQAT--QFASSSFV--LPFF---GLGQMYIYRGDENASQCFEKVLKA--YPNNYETMKILGSLYAASEEKRDIAKGHLYPDDVEAWIELAQI---LEQTDIQGALSAYGTATRILQEADVPPEILLHFRLGNLGEAKKYFLA-SLDRAKAEHYY-------------NAISVTTSYNLLYEAMC------- | |||||||||||||
6 | 6rwbA | 0.12 | 0.11 | 0.90 | 0.62 | MRFsearch | ----------------DKLEIRLYNLRHNLNLDLIERAKSAVSSVIQFGNSLQSVLERQDNEAMTLLFQQQQQKVLQHTKDIQNNNIQVLQANLEATNSLKSAISSREQSGLDLRIDAGAV------NIASVAPLMLAAALDTAGAVPYATSATLQISAGLTESRANINDIKANYDRREQEWTLQKNQADKDAEQLAHQYTSVQEQLNMAQKQRNLA | |||||||||||||
7 | 3cazB | 0.10 | 0.09 | 0.89 | 0.94 | FFAS-3D | -------SSNEHWTSLKEVEKVLDSVEPKLTSSGTKWRVVAQHIKDICSDLNQIFVVQAGASAAHDFDVRYLDIHKHGREARLLEKIQKYRQEIEEIKKEYK-ETDKYRERYDHYKVKLDNLEKKNKDQ--ERIERNQQKFKDAEAAYSSVCADLIQKETVWKKHVSIFAEAA---SAVWSTQLQY---------AKALEAAANPIVPYLQQEEQ-- | |||||||||||||
8 | 6w2vA | 0.10 | 0.09 | 0.91 | 0.90 | SPARKS-K | ---------------ATDKEEVIEIVKELAELAKQSTDP--NLVAEVVRALTEVAKTSTDTELIREIIKVLLELASKRDPQAVLEALQAVAELARELAEKTG---DPIAKECAEAVSAAAEAVKKAADLLKRAAQAALELAKAAAEAVLIACLLALDYPDIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVKERCERAQEHP | |||||||||||||
9 | 2yfaA | 0.11 | 0.10 | 0.89 | 0.78 | CNFpred | ---------------AANTLAKLDAFSKQQAYLATTFKSENVKLLGELGDTISAYKLS---NKMRQGYDATRAARVS-MDSSAIRADQAMDALSQEVMARP--EADSVRLAQYQLISKARQQLLQVRIDVRGYIAESSANEQAALRQLDAALADTDNLKRQLPSEDARLQQFENAVLAYRDAVRQFRDAVANITTSRAEMTV--QGADIVKRSDALY | |||||||||||||
10 | 5j1iA | 0.09 | 0.06 | 0.68 | 0.83 | DEthreader | ---------VLALSAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKEAQA-VPATELEATKASLKKLRAVLAQTDVRQRELEQ-LGRQLRYYRESADPLGAWLQDARHGKVEECQRFAKQYINEVIQEYVDLRTH----------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |