>PF16879 (301 residues) FYVNNNWYIFMRLHQILCLRLLRICTQAERQIEEENREREWEREVLGIKRDKSDSPAIQL RLKEPMDIEVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIV RQLQHIVSDEICVQVTDLYLSENSNGATGGLLSSQSSRALGEAAYQRKAEQLMSDENCFK LMFIQSRGQVQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVF LPRNLRRIRKCQRGREQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDY M |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FYVNNNWYIFMRLHQILCLRLLRICTQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDIEVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTDLYLSENSNGATGGLLSSQSSRALGEAAYQRKAEQLMSDENCFKLMFIQSRGQVQLTIELLDTEEENSDDPVEAERWSDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRIRKCQRGREQQEKEGKEGNSKKSMENVESLDKLECKFKLNSYKMVYVIKSEDYM | |||||||||||||||||||
1 | 3umgA | 0.07 | 0.05 | 0.67 | 0.71 | DisCoVER | STNVRAVLF-DTFGTVVD-WRTGI-----------------ATAVADYAARHQLEVDAVAFADRW--------RARYQPSMDAILSGAREFVTLDILHRENLVLLARAWHVL-TPWPDSVPGLTAIKAE-YI--IGPLS-NGNTSLLLDMAKNAGIPWDVIIGSDPQAYLRTLHPGEVMLAAA--------HDLEAAHATG--------------LA--TA----------------FILRP-VE--H------------------GPHQTDDLAPTGSWDISA-T-DITDLAQLR----- | |||||||||||||
2 | 6sdrA | 0.04 | 0.03 | 0.71 | 0.67 | DEthreader | MYGLIEHQARGHSTVRGAMTNHW-DL-NSD----KLYFTDYVRDPALKHPRCVINLLKHYE--KYAATGDKAGT--IMY-AMGWTQHSVGVQNIRAMAMIQLLLGNIGGV-A--TL-HI-LTDYFWLNIKFKGLFAWLVNVNESFFLPCCVPAETKPDGDIMLDMFKKVRY-AYP-P---------------------KLNIADWEEHSPTKVAKLMNSGNWHAFTGNLMARRWS------YRVTEHWQGLMTRRAWLVE----------------------------------------- | |||||||||||||
3 | 1vt4I3 | 0.06 | 0.06 | 0.97 | 0.59 | CEthreader | RHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG--------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 2qr4A | 0.09 | 0.07 | 0.82 | 0.58 | EigenThreader | ----------------------LSDQEFDEKYLELSEELKQSEKHKGTLDQGASQFLNAIEFVLRVYRQTEVIYVYAHLKNDQD----TGNTDYQALYARASSLFSKVSEAVDQIWQYFKEEPKLEVYRHYIQQIVD---------NRAHVLSAEQESLLAGADTFAVLNNADLVFPTIEG----ENGE----IVQLSHGVYGQLLESTGTHIKGHNFKAKVRNYSSAREASLSNNAPIEAKEKALEALLVHEGHSVHSYFTISTTNENILTEYLLETEKD------------PRVRAYVL | |||||||||||||
5 | 2pffB | 0.15 | 0.12 | 0.83 | 0.52 | HHpred | --GNTDYFELYQTYHVLVGDLIKFS---AETLSELIRT------TLDAEKVFTQGLNILEWLENPSNTPDKDYLAKLLGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPML--SISLTQEQVQDYVNKTNSHLPAGKQ-------------VEISLVNGAKNLSGPPQSLYGLNL---TLRKAK-APSGLDQFSERKLKFSNRFLPVASPFHSHLLVPASDNNVSAKDIQIPVYDTFDGSD-------------------- | |||||||||||||
6 | 5szsA | 0.17 | 0.10 | 0.60 | 0.48 | MRFsearch | ------------FSLALQARLNYVALQTDVLQENQKLAASFNKAINNIVAS----------------AEAIHTVTIALNKIQDVVNQQGSLNHLTSQLRHNFQ-------AISNSIQAIYDRLDSIQADQQVLAALNAFVSQVLN--------KYTEVRGSRRLAQQKINECVKGTHIFSIVNSAPDGLLFLHTVLLPT----------------------------------------------------------------------DYKNVKAWSGYGYVLRQ-PNLVLYSD------ | |||||||||||||
7 | 6ygaB3 | 0.11 | 0.07 | 0.64 | 0.73 | FFAS-3D | IYKPFEAYSFWYVYYLSHHLETFLKDSQNDIESNINAIHSNKKLKKLKAGEKKDQLRLKYRFADNEEQLQANITKSLCLIEVFQFAISNERLIHNLRFKPFNSIGEYEVFQFDIKLERATNFIETEV--RNVVSSIDEIQGIKGGDNNGVLVTGTRLVQELSLEYYCKLKHTSKDSHEYKVELVHTTEGWIQTLR---------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6w2rA | 0.11 | 0.07 | 0.67 | 0.73 | SPARKS-K | -----------GTTEDERRELEKVARKAIEAARETDEVREQLQRALEIARESG--------------TKVKLALDVALRVAQEAAKRGN-KDAIDEAAEVVVRIASDALEQALRVLEEIAKAVLKSEKTEDAKKAVKLVQEAYKAAKRTGTPDVIKLAIKLAKLAARAALEVIKRP-------------------------KSEEVNEALKKIVKAIQEAVESLREAEESGDP------------EKREKARERVREAVERAEEV------------------------------------ | |||||||||||||
9 | 3gjxA | 0.11 | 0.08 | 0.69 | 0.62 | CNFpred | -------IQLGRIYLDMLNVYKCLSENISAAIQANGEKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPLLDAVLIDYQRNAREPEVLSTMAIIVNKLGHITAEIPQIFDAVFECTLNMIN-EHRTNFFLLLQAVNSH---CFPAFLAIPPAQFKLVLDSIIWAFKHMRNVADTGLQ-------ILFTLLQNVA------QEEAAAQSFYQTYFCD----------------ILQHIFSVVT---------------------------------------------------- | |||||||||||||
10 | 6v85A | 0.06 | 0.05 | 0.73 | 0.67 | DEthreader | ------------V-HLNSP--IV-KHKLYYYILLGNQNWNQI-----------AQRLVNVRNFLILRHW--YVNVILWP-RILPL-IPDFFIGIIIILVALLTYMTFEIVLMVSDMYEGRHNILSLCTVSTYLNPLK-FVYAQLQMSLRQFHFLTAISSHFIFYQGRILT-ARLTENG---------------FTPASSYTSS---------II-AITCGELLIVYVDAILWGCRV--V-GDLEL-RTLLSLIHNGLELPKI--EKFALTL-MYAAFASNNY-----SNF----------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |