Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | YFVSYKNAEAYCVDNGAVLPADQTEAAHQSLQSAIKRVITGSDAFSYLGGDAVYSSGEAIEADKRCKPGDIASSRYCVYRWNKGLFAKALPDGQGVAFWRGSYIKYDGAASMNGYPSFWGGEYPKRGQLYTLSWYHTGDDVTTWYDGKDMSGRIKWASDNPDTKTENYVILCE |
1 | 2nanA | 0.03 | 0.02 | 0.58 | 0.62 | DisCoVER | | SCYIF--LQ--EA-IKVESIDVR------------------NQCTGADMISIHENAFI---LD-TLKQW--GPDDILLGMFYDWFDWTDQDDDEDLVDTCAFLH--IKTGEWKKGNCEV---SSV-EGTLCKT------------------------------------AIY- |
2 | 5fjsA | 0.03 | 0.02 | 0.69 | 0.67 | DEthreader | | ---IDDSYVQGA----P-LG-------G-----------------FGAGTIGRTYNG-G-----FSR-W---HLEKNK-QFSPII---P----YNYETYPVANMIEWNGEYSSLAYKWMIDQLFNEYYDGGTAWENGKVGRNNMFGLLECFDYNYYETLVRSLVWDIE---RM |
3 | 1hr0W | 0.10 | 0.04 | 0.41 | 0.49 | CEthreader | | --------------------------------------AKEKDTIRTEGVVTEALP-------------------NATFRVKLDS---------GPEILAYISGKMR-----------MHYIRILPGDRVVVEITPYDPTRGRIVYRK------------------------- |
4 | 5iigA | 0.06 | 0.05 | 0.94 | 0.70 | EigenThreader | | GFILKPVFQVRLDS-KPFFKENLYDIARTSGTELKLIILKHLPVAITSIYFDNENLDLYYGRLRKDEG---------AEAHR-LRWYGGMSTDTIFVERKTHREDWKKPENLEALASEIQYVMLKKKLRVRSFYFQLPGDARTMVREDNFDGVDRTHKNWRRTDPYAVLNVKL |
5 | 6a7sB | 0.17 | 0.11 | 0.63 | 0.36 | HHpred | | GSRGWEGSKAFCESKDASLVTVECSKEDDFIRGI-LSG-QTAKHYYWIGARWNEE--------------------HNDYRWIDG--SPF------------------------TF-IGWGPGKPDN-NKGCLDYLNYKEVVWQWNDVDCEN--------------TNGPCICE |
6 | 2ls8A | 0.22 | 0.13 | 0.60 | 0.32 | MRFsearch | | --KTWAESERNCSGMGAHLMTISTEAEQNFIIQFLDR-----RLSYFLGLRDE--------------------NAKGQWRWVDQT-------------------------PFNPRRVFWHKNEPDNGENCVVLVYNQ--DKWAWNDVPC---------------NFEASRICK |
7 | 6a7tA | 0.19 | 0.12 | 0.62 | 0.65 | FFAS-3D | | ---GWEDSKTFCESQNAALVTVESSEEDDFIRGVISAQSAFH--YYWIGGSWDAEHSE--------------------YRWIDGSSISFNG---------------------------WGPNRPDADEGCMDY-LNYKEIVWQWNDHQDCVNT-------------KGPSICE |
8 | 5vybA | 0.19 | 0.12 | 0.62 | 0.88 | SPARKS-K | | EEKVWSKSEQNCVEMGAHLVVFNT----EAEQNFIVQQLNESFSY-FLGLSDPQGNNN--------------------WQWIDK-------------------------TPYEKNVRFWHLGEPNHSAEQCASIVFWKPTGWGWNDVICE---------------TRRNSICE |
9 | 1tn3A | 0.13 | 0.08 | 0.58 | 0.95 | CNFpred | | QTKTFHEASEDCISRGGTLSTPQTGSENDALYEYLRQSVG-NEAEIWLGLNDMAA-AYKNWETEITAQPDGGKTENCAVLSGAGKWFDKR---RDQLPYICQFGIV------------------------------------------------------------------- |
10 | 2v3qA | 0.03 | 0.02 | 0.81 | 0.83 | DEthreader | | INGGPQYIGVGSGKGIASDSKLTA-TELATYAADKEP--G-WGKLIQVPSVATSVAIDLVLCFYTTE--FTRFLNAK-VTT----VPLPAAARGNPVWVPVFG-A---TTG---GGV-VAYPDGYLGFTNLIFSQCYA------R-FFTKHYGKARAFLTA-IG--GRP---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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