Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MASILLTLFRRTKKKYKRHTDDQASNNQVPKTGQEHGRTSCRAPVENMNRLRGECLRMMEVLKEEMWRIYPVLLPQMELLDKECQTPELGQKIQMTYNWTQWLQTLYTMIMEENVPDMDLLQALREGGVITCQEHTMGMYVLYLIQRCCPML |
1 | 4obyA3 | 0.09 | 0.07 | 0.82 | 0.52 | DisCoVER | | ----------KLANAVGIGAVKYADLSKNRTNMLANTAPMQAYVLFIDEEQLAAAP--VI-IREDREAQLAARLLQFEET---LTVVEGTPHVMCAY-LYD-LAGLFSGFCENEEVRN--RLKLAQ--LT--AKTLKLGLDTL--GI-ETV- |
2 | 4av3A | 0.03 | 0.03 | 0.91 | 0.83 | DEthreader | | -----VIAILLTGVAFLLGAVSASGIGMMGLGGFACGALLESFGAIVSSIILSYSYMFSQ------GALGAAITYYFSGYLISATKAATSDNALKQMGYPAFIAILTLVTLLGFGGVLIGTVLSGAMLAVGP-SLDILIKIMSVVSVIAV-K |
3 | 3jacA | 0.05 | 0.03 | 0.71 | 0.54 | CEthreader | | --------------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 2hr5A | 0.05 | 0.05 | 0.93 | 0.63 | EigenThreader | | RTMTKKFLEEAFAGESMAHMRYLIFAEKAEQEGFPNIAKLFRAIAYAEFVHAKNHFIALPENLQMGIEGETFEVEEYPVYNKAAEFQGEKEAVRTTHYALEAEKIHAELYRKAEIKKVYIC--PI--CGYAPEYCPVCGAPKE------KFV |
5 | 3k7dA | 0.12 | 0.11 | 0.91 | 0.34 | HHpred | | ---DGRQFYLRLAQRISTRTSSGIL-YEV-DARLRPSGA-AGMLVTSAEAFADEHLVLFDAVRREIMTLPKTLQTEVEKMRAHLGNIKADEGGIDIEFITQYLVLRY----AHESDNVRILELLAQNDIMEEQEAMALTRAYTTLRDEL--- |
6 | 6wg3E | 0.09 | 0.08 | 0.87 | 0.37 | MRFsearch | | --LLLSLLGRLLVHQFSNKS------------------TEMALRVASLDYLGTVAARLRKDAVTSKMDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTLETEKKIMHRAENRKKFLRSDTVDYDDACLIVRYLASMRPFAQSF |
7 | 2rldA | 0.12 | 0.08 | 0.63 | 0.70 | FFAS-3D | | ------------------------------------GREDKDNVVDKSLEFAVRIVNLYKFLVNQILRSGTSIGANIREAEQS------------RADFINKLNIALKEANE----TEYWLELLIRTEYITREQYESINNDSTEINKL---- |
8 | 4uosA | 0.10 | 0.09 | 0.91 | 0.63 | SPARKS-K | | IKKMLEKAIKKVKEMLEKMIKEIKLENGED----------SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELG----VDNEEVKKMLEKMIEEIKKMLEKAEMLEIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIEL |
9 | 2qnaA | 0.12 | 0.09 | 0.79 | 0.55 | CNFpred | | VQKTTLVIMERLQQVLQM---------------------------DLQSLLCATLQNVLRKVHQDALQISDVVMASLLRMFQSTAG-----SGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRAL |
10 | 1re5D1 | 0.06 | 0.05 | 0.86 | 1.00 | DEthreader | | -FTA-PAMREIFSDGRLQM-DTGALA-N---------AIATAGNSASQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPLVTLGMKLAGVLGALTRHRQRLQELEFASV-GL--GS---GKFGRDLIGAATRVPLLTLPIC-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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