>PF16788 (214 residues) KENVKRMKTSEQINENICVALEKQTALLKQVKHLIRQEIYSINYKLFDNKLKELTERIGK TQCRNKHEAIADELFAKISKLQRRIKAVLQSQKNCLEPNVLTSNTACKVTNSETVNLEKN PESVSSPDEGQTSVSSEPSNPSAKASEKVNLSRDHSEAVSESNDDVMLISVESPNLTTPI TSNPTDTGKTTSGNSNNSNNSPGAETEVTAVEKK |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KENVKRMKTSEQINENICVALEKQTALLKQVKHLIRQEIYSINYKLFDNKLKELTERIGKTQCRNKHEAIADELFAKISKLQRRIKAVLQSQKNCLEPNVLTSNTACKVTNSETVNLEKNPESVSSPDEGQTSVSSEPSNPSAKASEKVNLSRDHSEAVSESNDDVMLISVESPNLTTPITSNPTDTGKTTSGNSNNSNNSPGAETEVTAVEKK | |||||||||||||||||||
1 | 1n81A | 0.06 | 0.04 | 0.66 | 0.54 | DisCoVER | -----HAPL--SPRIRKVGDI-------------------EFHACSDY-I---YL-LM--TLSKDPKFNYA---L--KDRVSIRRYVRK-NQN-RY--NYF--LIEERVQDNIVNRI------SDRL---ISYCTDK-----------E-V---TEDYIKKIDDYLWV-EQRVIEEVSINVDHAREVEKKIMNLILFYEAARISFLIVDSY--- | |||||||||||||
2 | 4av3A | 0.06 | 0.04 | 0.73 | 0.67 | DEthreader | ------LFTT--QLNIYNFV-PFA-MTVSGYALGCSIIAM--------------------VGDNVGDVAGLGADLLESFVGAIVSSIILASY--MF--PIYVHPKEIQALISYPFFALVGLGCSM--ILAIGIGFT-SVYLDAVGNTTAAI---GKGFAI------AASLSYSQI-------MGYFIALTPL--VTGFLLGAEFVGVLT-TVS- | |||||||||||||
3 | 5htfA | 0.10 | 0.10 | 0.95 | 0.59 | CEthreader | GSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKY-EEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKAYYKTWEPDITVRHILVDDEATAKEIQTKLKNGEKFTDLAKEY---STDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVK------STYGYHLIQLVKKT | |||||||||||||
4 | 4xzeA | 0.08 | 0.07 | 0.92 | 0.62 | EigenThreader | VKVWDANYQKLRTETPPAEALLAYQKAALNWRKDVGATGLAKLVELEGVMDKAKASIAQLEGWVKENLKGVRESYKTALALAKQVFSSYYWLWKAG----VTPVTFPSVSQFLFELGKNPVLTSGRMSELGISFGAVPVTSPDDAAQGSGH----TKAVLNYKTKT----------EVGNPCACIISSLFEIQKAGYDIESMDIVASEHLLHQS | |||||||||||||
5 | 2j69A3 | 0.19 | 0.07 | 0.34 | 0.29 | HHpred | ------------------LTRERAIAELRQVRTLVARRIP-----LLEQDVKQKQTREINREEFNRLKNLQEDVIAQLQKIEAAYSNLLAYYSHH----------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 4tqlA | 0.18 | 0.08 | 0.44 | 0.38 | MRFsearch | -----------EMVELIQKAIELMRKIFQEVKQEVEKAIEEMKYDEAKKKIEQMIQQIKQGGDKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQI----------------------------------------------MQEAKQKMEK--------------------------------------------------------------- | |||||||||||||
7 | 6u1sA2 | 0.19 | 0.08 | 0.45 | 0.65 | FFAS-3D | RDEIKRFAEDARKKIEVLALLKRSREYLKKVAQLVIAFVFLILLILLSWRSEELIRELEEARMKQQHTAYLQAALTAWEIISKSVIALLLLQQNQL---------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 3jc8Na | 0.10 | 0.10 | 0.93 | 0.81 | SPARKS-K | --------MMIRINAVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRPVRMMDALASATPKKVWVKTFSENNNAVSAVSHDNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDATIEEFPEAQVSPFFKNIDLQTAKQVGG------AQVGVPILVEFKITMTSNY | |||||||||||||
9 | 4tqlA | 0.20 | 0.08 | 0.41 | 0.53 | CNFpred | ----------QEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQGGDKQKMEELLKRAKEEKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMK--------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6rwbA | 0.08 | 0.07 | 0.85 | 0.83 | DEthreader | --TLFYLKLEVSNLEKSKIQLEGKKKEEEIKLQA-DN--S-----EIIIRLADYWDINIAIAEKIHTIINIANKLR-INSRRALVNYYLAKNVSGDEKIQQY-INRCVDGIS-HFSSDNHG----------LRYNKTEFNTFEQSINN-LKSVKSALQSYLSYKLAIDTIKELYHFFLGKT--E-PCQYYWRSINLSW-YRNRLYVAAW----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |