Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | VTVFYNPRDTPLNGRQQIYLMGGWNRWTHKRHFGPIAMHRPVDGGEHWQATLTVPKDAFKMDFVFADVPGGDGTYDNRGGFDYHLPV |
1 | 1gviA | 0.16 | 0.15 | 0.92 | 1.17 | DEthreader | | LHLRLQTK---KNDVDHVELLFGDPYEWHWQF-QTMPMRKT-GSDDYWLAEVKPP-YR-RLRYGFVLRAGGEKLVYTEKGYYFCFPL |
2 | 6h3jC2 | 0.05 | 0.05 | 0.90 | 1.17 | DEthreader | | LDFTIASND-I-TFQTNVKVLLLQN-GNFNTAIKNIPPQYTI-G-NQLVYKTQFWGGTNEYTILVYYKESRYQRVIG----KGNANS |
3 | 2c3wA | 0.19 | 0.16 | 0.84 | 1.13 | HHpred | | ITIYYK------TGWTHPHIHYSLNAWTTLP---GVPLTKSE-YEGYVKVTIEAEE-GSQLRAAFNNG---SGQWDNNQGRDYDFSS |
4 | 2c3wA | 0.18 | 0.15 | 0.84 | 1.12 | SPARKS-K | | ITIYYKT------GWTHPHIHYSLGAWTTL---PGVPLTKSE-YEGYVKVTIEAEEGS-QLRAAFNNGSGQ---WDNNQGRDYDFSS |
5 | 2laaA | 0.19 | 0.16 | 0.84 | 1.80 | HHsearch | | VTIYYK------KGFNSPYIHYRPASWTAAP---GVKMQDAE-ISGYAKITVDIGS-ASQLEAAFNDG---NNNWDSNNTKNYSFST |
6 | 6h3jC2 | 0.05 | 0.05 | 0.91 | 1.17 | DEthreader | | LDFTIAS-NDITFQTPQVKVLLLQN-GNFNTAIKNIPPQYTI--GNQLVYKTQFWGGTNEYTILVYYKESRYQRVIG----KGNANS |
7 | 1gviA1 | 0.16 | 0.15 | 0.92 | 1.17 | DEthreader | | LHLRLQTK---KNDVDHVELLFGDPYEWHWQF-QTMPMRKT-GSDDYWLAEVKPP-YR-RLRYGFVLRAGGEKLVYTEKGYYFCFPL |
8 | 1gviA | 0.15 | 0.14 | 0.91 | 1.17 | DEthreader | | LHLRLQTK----NDVDHVELLFGDPYEWWQFQ--TMPMRKTGSDFDYWLAEVKPP--YRRLRYGFVLRAGGEKLVYTEKGYYFCFPL |
9 | 2eefA | 0.15 | 0.14 | 0.94 | 1.03 | HHpred | | -TVK----VQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTGSDRDTFSFDISLPEKYERMEFAVYYECNGQTYWDSNRGKNYRIIR |
10 | 2laaA | 0.19 | 0.16 | 0.84 | 1.10 | SPARKS-K | | VTIYYKK------GFNSPYIHYRPASWTAA---PGVKMQDAE-ISGYAKITVDIGS-ASQLEAAFNDGNNN---WDSNNTKNYSFST |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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