Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KLDVFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGDKCDDGTQDLLHFSTKEQFDEAEPATLNGLDQPEQTTLPIPQLPQETQPSLEHEPETHSLHLQPQHEESVLPTQSTLTADDMRRAKRIR |
1 | 2pffB | 0.23 | 0.07 | 0.30 | 1.03 | MRFsearch | | --DDYGFKQGGGGGGGGGGGGGGGGGG------------------------------------------------------------------------------------------MDLYKTSKAAQDVW |
2 | 5jcss | 0.06 | 0.05 | 0.95 | 1.04 | SPARKS-K | | FQLISTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILA------QKFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKGAHTRVVSVDILFKNNGINKPDQLIQSSVYDSIFSEAADCF |
3 | 2bfuL1 | 0.07 | 0.07 | 0.92 | 0.78 | DisCoVER | | SVLTKFALSKAMAGGDVLLDYLYDLRTHVITGKIKVTATTNISDNS-GCCLMLAINTDVTICSQ-DSMTWNPGKNFS-FTFN-PNPCGDSWSAEMISRSRVRMTVI-----CVSGWTVIAKLDWSI-VNE- |
4 | 6khkA | 0.04 | 0.03 | 0.75 | 0.67 | DEthreader | | GEHRRYIVIA--DDHATAVWA--DAGDNAAEVI-GHS-----------WGSMIRMATRPGTRLDG---L-ALCGVAHNFGAPMSTRLQGLADIYAMNGDSFYAMVAVELHLYVHNRVE------------- |
5 | 7ck6A | 0.08 | 0.08 | 1.00 | 0.39 | CEthreader | | FVNWQVDGEYRGSDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQAGMHATYYHKASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKANLLFK |
6 | 6y79G | 0.05 | 0.05 | 0.87 | 0.53 | EigenThreader | | KDEVAPSAVIPVTTFLRDNTSTQYKRHNSRIRLKTPSITCLYEGANWFEREAYDMYGVFRIMTFEGHPLRKDFPLTGYELTQAFRNFS----AGSTAWEPVGPGRDDRPDSFKLPTPK------------- |
7 | 3bboG | 0.22 | 0.18 | 0.79 | 0.27 | HHpred | | ---ASTLTRAEVRGGGRKPYKTGRRRGSGPKPWTIKMVVEEFAFEKPKTKDFIAAMQRWGLDPA----EKSLFFLMDLVENVE-------KSGRNIRTLK------------LLTPRSLNLFDVLNAEKL- |
8 | 2pffA1 | 0.18 | 0.07 | 0.37 | 0.72 | MRFsearch | | ----GGGGGGGGGGGGGGGGGGGGGGGGKDKYVLITGAG----------------------------------------------------------------------------KGSIGAEVLQGLLQ-- |
9 | 1j5aK | 0.16 | 0.15 | 0.91 | 0.38 | FFAS-3D | | -----GRKMYGQKGTGNARHGDRSVPGGGPK------PRSYDYTLPRQVRQLLAMAIASRQEGGKLVAVDGFDIADAKTKNKQNGLDGTEKVLLVTDDENTRRAARNVSWVSVLPVAGVNVYDILRHDRL- |
10 | 3l6wA | 0.11 | 0.11 | 0.98 | 1.00 | SPARKS-K | | DITETVHNLNLTDDHVKFRFHTELDASVLPAPIIVRRPNNAVFDIIEPIGKDVNLPPK--VVVKRGTKIMFMSVDEAVTTPLNLGSYTAMFKCKVPPFSFH-AFELGKMYSVESGDYFMTASTTELCNDNN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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