Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | PEPGASGHHVHTDGSHGGPGGQPEPGWHRTGATVPRLPSPSGGPWWREQEPRPAEAAHTGAFGARPGGQELRPGVPGLGEDAGRPVPPSYS |
1 | 2kpyA | 0.24 | 0.12 | 0.49 | 1.12 | MRFsearch | | ---PPGAAPPPAAGGSPSPPAD----------GGSPPPPADGGS---------------------------------PPVDGGSPPPPSTH |
2 | 3boiA | 0.25 | 0.22 | 0.88 | 1.56 | SPARKS-K | | -CKGADGAH-GVNGCPGTAGAAGSVG----GPGCD---GGHGGNGGNGNPGCAGGVGGAGASGGTGVGGRGGKG--GSGTPKGADGAPGAP |
3 | 3boiA | 0.15 | 0.13 | 0.89 | 1.35 | MUSTER | | ---CKGADGAHGVNGCPGTAGAAGSVGGPGCDGGHGGNGGNGNPGCAGGVGGAGGASGGTGVG----GRGGKGGSGTPKGADGAPGAP--- |
4 | 2kpyA | 0.08 | 0.05 | 0.71 | 0.77 | DisCoVER | | GSKLCEKTSCDNCDKKC---------IWEKAQHGACHKR--AGKESC-----------FCYFDCSKSPATPAPGGSPPPPAD--GSPST-- |
5 | 6y22A2 | 0.13 | 0.13 | 1.00 | 0.57 | CEthreader | | SLPGHEDCGTILIVYSIPHGIQGPPFTARGFPRQCYLPDNAQGRKVLEKRRLIFTVGTSSTTGETDTVVWNEHHKTEMDRNITGHGYPDPN |
6 | 5td3A | 0.12 | 0.12 | 1.00 | 0.72 | EigenThreader | | DGKPVAGALVECANSHGFYSHFDPTGAQRDFNLRGAVRTGADGTYAFRTLMPVGYGCPPQGATQQLLGNRPAHRKLIWDDFAYATRTPRVG |
7 | 2b9mY | 0.29 | 0.12 | 0.42 | 0.24 | HHpred | | ----------RIDVRASGPGGQ---GVNTTDSAVRVVHLPTGITVTCQTTR---------------------------------------- |
8 | 5zcsE | 0.30 | 0.15 | 0.51 | 1.10 | MRFsearch | | ---GGGGGGGGGGGGGGGGGGGGG-------------------------------------GGGGGGGGGGGGGGGGGGGGGGGGG----- |
9 | 2ftcD | 0.15 | 0.14 | 0.97 | 0.40 | FFAS-3D | | -RISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLRGGGVAHGPRGPTSYYYMLPMKVRALGLTVKLAQDDLHIMDSLELPTGDP-- |
10 | 3bogA | 0.20 | 0.16 | 0.84 | 1.50 | SPARKS-K | | DGAHGVG----CPGTAGAAGSVGGPGCDG-GHGGNGGNGNPGCAGGVGGAGGASGGT-----GVGGRGGKGGSGTPK-GADGAPGAP---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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