Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | FSTTGQSRGPLEPPKIPKPWTLSCLRPAPPLRPSAALGYKERMSYILKDTSKSPRTMKKFLPKRKTERKPSDDEFILRKSTAALEEDAQILKVIEAYCTGASFQQCVSS |
1 | 2k87A | 0.05 | 0.04 | 0.75 | 0.72 | DisCoVER | | QPIDLVPTQ----------P----LPN--ASFDNFKLTC--SNTKFADDLNQMTLSVTFDVVAIHSFGAKLLKPIVWHATTKTTFKPNTWCLRCLWSTKP--------- |
2 | 3txxA | 0.04 | 0.04 | 0.83 | 0.83 | DEthreader | | H----VTTETYTKEEMHYDLKIA-PQLLKNKSLGVILMARVSIVDLANCATIP---V--INGM-S--DY-NH--PTELDLCTNRLTSIRGLLVYLMNDYEAKNPYDL-- |
3 | 1so4B | 0.03 | 0.03 | 1.00 | 0.51 | CEthreader | | AEEVDIIEVGTILCVGEGVRAVRDLKALYPHKIVLADAAIADADWVTVICDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKV |
4 | 1m1jD | 0.05 | 0.05 | 1.00 | 0.55 | EigenThreader | | CRMQGIIDDTDQNYSQRIDNIRQQLADSQNKYKTSNRVIVETINILKPGLEGAQQLDENYGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIK |
5 | 6oycB1 | 0.11 | 0.08 | 0.73 | 0.29 | HHpred | | ------NWATKENIPNNMEWLF-----IKPDQISDFVTTNNY--------L--------TS-SKLLQKLPRKISALLLTEQTYGPELSSLSSFFEVYEVFYPKDKHAT- |
6 | 2pffB | 0.08 | 0.04 | 0.46 | 0.50 | MRFsearch | | --------------------------------PDDDYGFKQGGGGGGGGGGGGQGSQEQG------------------MGMDLYKTSKAAQDVWNRADNH--------- |
7 | 4hadA2 | 0.19 | 0.06 | 0.28 | 0.32 | FFAS-3D | | -----------------------------------------------------------------------------KEEVVTLENSKLNQKVIDAIYRASEKDGWEA- |
8 | 3hgfC | 0.06 | 0.05 | 0.73 | 0.90 | SPARKS-K | | KIENIVTKIDKKKYIYKKL------------------LNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKSENMIKSMEK-----------YIKDLDEIKEQS |
9 | 5uflA | 0.12 | 0.03 | 0.23 | 0.46 | CNFpred | | ------------------------------------------------------------------------------------DSSSKVLELLLAFCSVTQLRHMLTQ |
10 | 4bujB | 0.03 | 0.03 | 0.98 | 0.83 | DEthreader | | YDFCKALIKISINQESLAWQFTMDAPIWLSSKLLEEY--TKDLRSIDFAILDTFAFAFDADYAKALIPFVGSIFSWVFAQKAISLCDGYRCSLDLYSGLLIKQKKSPDA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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