Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | KHFIEVIAAIAIIFVLGGCSMLQSAINDIKGSLVGNDYTIFTYDNYGSKVLETSGRKISITGNPVKTSDYDSDGDVKERYELSSVITITVDGKEIESCGDTCVFVQKGLKPDVNFTKKSIKGKESGALSSYASVARFLNKYKNMFGKSRIVVIKSQLGQPIAAYSGDEVYWKIPKNLPKMTKLMIDGKALYIHRANFQIIDKDLL |
1 | 1u0rD1 | 0.08 | 0.05 | 0.60 | 0.65 | DisCoVER | | ----------LTLDVVVRQGIVNRGWALNEVSLEKVLGVVVEID--G-RPVSAFGCDGVLVSTPT-GSTAYAFSAGGPVLWPEAILVVPNNGRPMVTPEATIAIEIEADG--------------------------------------HDALVFCDG-RREMLIPA--GSRL--------------------EVT-R-C------ |
2 | 4q2cA | 0.06 | 0.05 | 0.77 | 0.67 | DEthreader | | FWHPLLCH-LDVAAVTLQWRRV------------WKARI-------------GVLQARWFFGIGKASPAFQLQLRPRALRPHGISLLAF-LSSAVAFVGGHAGLV---V--WI--NEEYFPYAAQVPQLDYLERARQAERAASLGVGWVHFQLVYDEEGAAWFLPPYGVGQALLA-LQVKHVRALKTVLLI-VE----------- |
3 | 4ic4A | 0.04 | 0.04 | 0.99 | 0.54 | CEthreader | | SAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSVFAFFAEHLDWECSYTVTPSQKF--WGKSIELNNEGILRLKFKTTGELFEWTQPTTILKNLIAGERYMEPVNEFEVHSSKGDKSHILFDKAGMFSGRSEGFKVSIIPPPSSNRKKETLAGKWTQSLANETTHETIWEVGDLVSNPKKKYGFTKFTANL |
4 | 2jjdF | 0.07 | 0.06 | 0.95 | 0.67 | EigenThreader | | FPEHLEEEIRIRSACKQFREEFNSLPENREKNCSDYINASYIDGYK--EKNKFIAAQGIVMLTNLKER------KEEKCHQYWPIRKFCIQPKQLHFTGPIVVHCQRPQMVQFIYQALLEYYLYGDTVRIMKENMRTGNLPANMKKARNASFIDGYRQKDYFIATQGPKNDTLSE---AISIRDLNGEVRQFHFHPITVHCSAGA |
5 | 6mjpC | 0.08 | 0.06 | 0.72 | 0.38 | HHpred | | SRIVYVLLLFIASWSLYYLLGQEQ--DSKIPMFSGENLENISYDEQGIRNYVITSIHLDHYAKSG------------NTLFKAPILKVYREGQEWEITARRGILSK----------DQVLT-LY---------------------DD--VLAKNLLPDSGFDTLTTSEMSIQLKS-----RDFWADKP-VELRGPQFETHGQ--- |
6 | 6mitC | 0.08 | 0.05 | 0.69 | 0.87 | MRFsearch | | --RWVIILLSLVALILIGVNLDP--------TYKSDHSDTVVYSPEGALNYRLIAQHVEYFSDD------------GISWFTQPVMTTFDKVPTWSIKSDRAKLTN----------DRMLYLY------------------------GHVEVNALTADSQLRKITTDNAQINLV-----TQDVTSQ-DLVTLYGTTFNSSGLRM- |
7 | 6mjpC | 0.09 | 0.07 | 0.77 | 0.48 | FFAS-3D | | ---LSRIVYVLLLFIASWSLYYLLGQEQDSKMFSGENLENISYDEQGIRNYVITSIHLDHYAKSGNTLFKAPREGTLQEWEITARRGILSKDQVLTLYDDVLAKNLLPDSGFDTLTTSEMSIQLKS----------------RDFWADKPVELRGPQF----ETHGQAMKGNFADHSAEL------------------------- |
8 | 3lifA | 0.10 | 0.09 | 0.84 | 0.60 | SPARKS-K | | AQSETNLSHSLAEHATHTFQGADVVLDDIVSFKWRPHPDVAILDADGQLTYAS--------VKPVPALDNSDRSRANDDHTLLITGPIQSRTSGVWVFVVSRRLET-----------------TDGKFFGVVVATYFSTFYKTFLGPGGSISLLHSDGRLLIQWPSPDGYYLTVSPFDG-------LTKYLAYRRVTVARTEDSV |
9 | 4ggcA | 0.08 | 0.05 | 0.64 | 0.68 | CNFpred | | ------------------------------------YISSVAWIKEGNYLAVGTSAEVQLWDVQKRLRNMTSH--------SARVGSLSWNSYILSSGSGHIHHHDV---RVAEHHVATLSGH-----------------------SQEVCGLRWADGRHLASGGNDLVNVWPSA---AVKAVAWCSNVLATGGGHIRIWNVCSG |
10 | 4jspB | 0.10 | 0.07 | 0.75 | 0.67 | DEthreader | | SAATERAWRSISLSNIQDTWLQVH-QAAVPGTYRIIALQVIT-----SKQRPRKLTLFLLKGH-D----------------LRQDVIPL----STNSG---LIGWV-PHCDTALIRDRLLNIEHRIMHAVNNTAGDDLAKLLWLKWRRYTSLM-LGDRHPSLMLRLSGKI------------L-------HIDFGDFRLLAMEGL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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