>PF16465 (267 residues) LSNTVTGEELDGFDQVCGNGTASFRTEDGQYQLIDLASTEQSEVLATFDRSVLYHAPGAV VCWNAGNDYRYQFHDLTTGEMKPVYNVDADDKTLAVYATDGTLRVYDRTTGAILTDVNVD SVENQDSAQVWAVGEGYALVMLYPAGDHSKPTIRLYDAQGLVRQLAISASTPDGYYYFAP LTTTDGHAYFRYGYAGPNGKTLYDVLDENGNAVLKGLALCYSYYGGNGLNDLPAGAFMAR KGFYYGWMTPDGQWLYCRSIFASSTDE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | LSNTVTGEELDGFDQVCGNGTASFRTEDGQYQLIDLASTEQSEVLATFDRSVLYHAPGAVVCWNAGNDYRYQFHDLTTGEMKPVYNVDADDKTLAVYATDGTLRVYDRTTGAILTDVNVDSVENQDSAQVWAVGEGYALVMLYPAGDHSKPTIRLYDAQGLVRQLAISASTPDGYYYFAPLTTTDGHAYFRYGYAGPNGKTLYDVLDENGNAVLKGLALCYSYYGGNGLNDLPAGAFMARKGFYYGWMTPDGQWLYCRSIFASSTDE | |||||||||||||||||||
1 | 3fcsA | 0.10 | 0.09 | 0.87 | 1.00 | DEthreader | ----------DETRNV---GSQTLQTFKAHWNVLE----KTEEAEKTP-------------VGSCFL-YSPCRGNTLSRYKRYCEAGSVVELVLGAGYYFLGLLAQAIFSHVSQSLSFDSSNPEYDGYWGSVAVGTEYVVGAPTW-SWTLGAVEILDSYYQRLHRLRGE--QMASYFHSVAVTDGRHDLLVGAPYMAEVGRVYLFLQHALGAPSLLLTGTQLYGRFSAIAPLGYNDIAVAPGQVLVFLGQERSRPSQVLDSPFFAYA | |||||||||||||
2 | 5a1uD | 0.13 | 0.11 | 0.88 | 4.30 | HHpred | VWNHETQTLVKTFEPVFVNWVVTG-ADDMQIRVFNYNTLERVHMFEAHSRCIAVHPTQPFI-LTSSDDMLIKLWDWDKKSCSQVFVINPDNNQFASASLDRTIKVWQLGSSSPN-----FTLEGHEKGVN--------CIDYYSGGDYLIRLVKIWDYKTCVQTLEGHAQN-----VSCASFHPELPIIITGSEDGT--VRIWHS--STYRLE-STLNYGMER--VWCVASLRGSNNVALGYDEIIVKLGREEPAMS---M-DANG- | |||||||||||||
3 | 3ow8A | 0.14 | 0.12 | 0.90 | 1.17 | SPARKS-K | LFKQEQAHD-DAIWSVAWGETVVTGSLDDLVKVWKWRDEDLQWSLEGHQLGVDISHTLPIAASSSL-DAHIRLWDLENGKQIKSIDFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-------------RGKFILSIAYSPDGKYIDGIINIFDIGKLLHTLEGHAM-----PIRSLTFSPDSQLLVTASDDGY--IKIYDV--QHANL-AGTLSGHAS--WVLNVAFCPDDTHFVSSSSDVKVWDVTRHTFQVWGVKYNGNGS | |||||||||||||
4 | 6qk7A | 0.06 | 0.05 | 0.82 | 0.83 | DEthreader | AVRNVHLEV-DVHEITISWFAVSSVEEIKRRAFRVFSQLDSASE-PVT-GMEHQLSWIASIQRKTDL-DSVDVIFFERHGEFDTRLPLDEKVESVCWNNSEALAVVLA-----RI-QLWTSKNHWYLKQELYASDIDV-VDGTVNIRDFETNVLD------INKDVLIFASIVCEFPK-------DSLRQVAFIN--DSI-VGVL----------------SRIAITIVE-L--NHLVYETGTVCQLDA---EGQLMEITKFPQLTN | |||||||||||||
5 | 3fcsA1 | 0.10 | 0.09 | 0.87 | 1.00 | DEthreader | ----------DETRNV---GSQTLQTFKAHWNVLE----KTEEAEKTP-------------VGSCFL-YSPCRGNTLSRYKRYCEAGSVVELVLGAGYYFLGLLAQAIFSHVSQSLSFDSSNPEYDGYWGSVAVGTEYVVGAPTW-SWTLGAVEILDSYYQRLHRLRGE--QMASYFHSVAVTDGRHDLLVGAPYMAEVGRVYLFLQHALGAPSLLLTGTQLYGRFSAIAPLGYNDIAVAPGQVLVFLGQERSRPSQVLDSPFFAYA | |||||||||||||
6 | 3iytA | 0.11 | 0.09 | 0.85 | 4.33 | HHpred | ----------KKAVACFSQRIASC-GADKTLQVFKAETGEKLLEIKAHELCCAFSTDDRFI-ATCSVDKKVKIWNSMTGELVHVNHFTNSHLLLATGSSDCFLKLWDLNQKECR-----NTMFGHTNSV--------NHCRFSPDDKLLAGTLKLWDAANERKSINVKQFF------L--NLEDPQERIMVAA-KNK--IFLFDI--HTSGLLGEIHTGHHST--IQYCDFSPQNHLAVVALSQVELWNTSRSKVAVHGVMFSPDGS | |||||||||||||
7 | 2ymuA2 | 0.09 | 0.08 | 0.88 | 0.52 | DisCoVER | HSSVWGVAFSQTIASASDDKTVKLWNRLQTLTGHSSSV--WGVAFSPDGQTIASASDDKTVKLWNRNGLLQTLTGHS-SSVRGVA-FSPDGQTIASASDDKTVKLWNRNTGHSSSVWGVAFSPDDQTIASASDD--KTVKLWNRN-----GQLLQ-----TL--T-GHS-----SSVRGVAFSPDGQTIASASDDKT--VKLWNRN-----GQLLQTLTGHSS-SVRGVAFSGQTIASASDDKTVKLWNRNGLQTLTSVWGVAASA- | |||||||||||||
8 | 5oqlA | 0.12 | 0.10 | 0.82 | 0.32 | MRFsearch | --------------------LLVAGFSNGIFGLYEMPDFNLIHTLSISIDFVTINKSGEWLAFGASKLGQLLVWEWQSESYILSLVYSPDGQRIVTAADDGKIKVWDVESGFCIVTFTEH-------------TSGVTACEFAKKGSVLFGSVRAWDLIRNFRTFTA----PERLSFTCMAVDPSGEVIAAGSIDS-FDIHIWSVQ---TGQLLDRLSGHEG--PVSSLAFAPDGSVLVSGSRTARIWSIFSRTQTSEPLQ------ | |||||||||||||
9 | 6chgA | 0.09 | 0.09 | 0.95 | 1.15 | SPARKS-K | -MLQFDKQVLPASCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECLCWSPDSKCIASGSE-DFTVEITHIIYGRIRRSICYNNKGNILCSSSMDESIKEWHVLSGT--ALKTMSAHSDAVVSIDIPKFDSSILSSGSYD-----GLIRIFDTESGLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNV--VKLWEY--TRGTVVRTFLWKLKYNCGLELIYPQGKDPLVISGNDSMCVWNVYQKISPLISISASYDKV | |||||||||||||
10 | 2eceA | 0.11 | 0.10 | 0.99 | 0.37 | MAPalign | DFIAVINDELHHFGWNIERRFLIVPGLSSRIYIIDTKEPKIIKVIEPVSRLHTVHGPDAIYISALGGPGGILMLDHYSFEPLKWAFWWLPNEVLVSSEWGNRIHFWDLRKRKRIHSLTL--GEENRMALLRPLTKLMGFINMVVSLKDLSSSIWLWFYKWNAEKVEIPAEKAVPPLVTDIDISLDDKFLYLSLWGI--GEVRQYDISNPFKPVLTGKVKLGGTGAPQMLEISRGRRVYVTLKGWMVKLNAGLEIDFFVDFGEARSHQ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |