Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VLPAGTLVKFGKPGDSVEQMKPLINCKALGATGLTGSFVDCTTLMDTNKQFISDMPEGPEKSLGFIDDPENSDFVSFLNAAEKRDTVQFYIALPNKRTATMVLALSGWEMNDINAPASEVIQITVKGKQNNLVWGIA |
1 | 6p3eA | 0.20 | 0.17 | 0.85 | 1.00 | DEthreader | | -VKGATTLWVYKGSGSDVDWSRLAKVKDLTPELTAESYDD--------------QKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVT-AKE--VITRTV-KVT-NVGRPS- |
2 | 5ngjA1 | 0.06 | 0.05 | 0.79 | 1.00 | DEthreader | | QLLRNTRIFVSTVKTGHNKTQEILVQDDISWG-Q------------------------AAEWSFSTYILPIVPDYMLWHALSSLAMLHIYILT-DKTWSYIDSCQINQAEVN-VDIEDIGRVTWSGN-G-NQLIPLD |
3 | 2k4qA | 0.22 | 0.21 | 0.97 | 2.21 | HHpred | | VKGAGTTLWVYKGSGDDVDWSRLAKVKDLTPGELTAESYDDSYLDDEDTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKA---VTAKEVITRTVKVTNVGPSMAE- |
4 | 6p3eA1 | 0.19 | 0.18 | 0.93 | 1.46 | DisCoVER | | VKGAGTTLWVYKGPYPDVDWSRLAKVKDLTELTAESYDDSYDDEDADWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVT---AKEVITRTVKVTN--V----- |
5 | 6p3eA1 | 0.23 | 0.22 | 0.93 | 1.35 | MRFsearch | | VKGAGTTLWVYKGSLSDVDWSRLAKVKDLTPGELTAESYDDSYLDDDWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGK---AVTAKEVITRTVKVTNVG------ |
6 | 6p3eA1 | 0.22 | 0.20 | 0.93 | 1.46 | SPARKS-K | | VKGAGTTLWVYKGSGDPYDWSRLAKVKDLTPGELTAESYDDSYLDDDWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTA---KEVITRTVKVTNVG------ |
7 | 6te9G | 0.09 | 0.08 | 0.91 | 1.03 | MAPalign | | --GKDLLIKLD------LQFETIAGLRATRISFNAE-TVDVTSSQGGWRELLGAGVRSASISGAGVFKD-ADTDERARQIFFDGEVPEFQVIIPDFGIVQGPFMITSIDYA---GSHNGEASYELAMASAGALSFTA |
8 | 6te9G | 0.09 | 0.09 | 0.93 | 1.02 | CEthreader | | QNGKDLLIKLDL------QFETIAGLRATR-ISFNAETVDVTSLESGWRELLGGAGVRSASISGAGVFKDADTDERARQIFFDGEVPEFQVIIPDFGIVQGPFMITSIDYA---GSHNGEASYELAMASAGALSFTA |
9 | 6p3eA1 | 0.23 | 0.21 | 0.93 | 1.39 | MUSTER | | VKGAGTTLWVYKGSGDPYDWSRLAKVKDLTPGELTAESYDDSYLDDDWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSI---GKAVTAKEVITRTVKVTNVG------ |
10 | 2k4qA | 0.22 | 0.21 | 0.97 | 3.75 | HHsearch | | VKGAGTTLWVYKGSGDDVDWSRLAKVKDLTPGELTAESYDDSYLDDDWTATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKA---VTAKEVITRTVKVTNVRPSMAE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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