>PF16443 (227 residues) EYKILLTGASFASPQNGWFEIGCRKLNAEAINRAIGGEAIANTANRMANGTLYSKEELEN IDALVIMQVHNKDVYEELQLKDKYTDYEVPFDRSNYAAAYDYVIKRYLTECYELRNDTTS KYYNTPYGKPAIIVLCTHWHDCRTVYNESIRKLAAKWGFPLIEFDKYIGFSKNVLHPVTG KPFSQLYSTDIQVTEGIAYGHHPIRGEQSYMQQRMAAIFVDSMNRIL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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Seq | EYKILLTGASFASPQNGWFEIGCRKLNAEAINRAIGGEAIANTANRMANGTLYSKEELENIDALVIMQVHNKDVYEELQLKDKYTDYEVPFDRSNYAAAYDYVIKRYLTECYELRNDTTSKYYNTPYGKPAIIVLCTHWHDCRTVYNESIRKLAAKWGFPLIEFDKYIGFSKNVLHPVTGKPFSQLYSTDIQVTEGIAYGHHPIRGEQSYMQQRMAAIFVDSMNRIL | |||||||||||||||||||
1 | 3cinA | 0.09 | 0.07 | 0.83 | 1.00 | DEthreader | MVKVLILG---Q---GYVASTFVAGLEKIVGSYDVDRIKGVLELEAVDTLVKEWTEL--DPDVIVNTCTTEAFVPFGNEDLLKAIENNDK---ERLT-ATQVYAYAAALYANKRG-------------G-AAFVNVI-P---T-FIAND-PAFVELAKLVVFGDDGATGATPFTAD------V-QFNIGFLLDKNKKIKPTGYEPLGDKNDSPALGGLLVDLVRLGK | |||||||||||||
2 | 4q7qA | 0.16 | 0.14 | 0.87 | 1.07 | HHpred | ELTWVAIGDSITYVSKGYLTRLNEILNLKYINQGHNGWTSGGIAGNIDS------LGLIKADVYSVFLGTN-DWWQGRPV-GKLDDYQHDNGNTTVYGSFRIIISKIRQL------NPE-----------AKIVLITP-QQTLEEFANAVLTIGRYEQIPVVDLYHHPLLTLRNVNPKNGKYVNIPFPYPPAAVNLTYDGLHPSDK----GNAIIASALADVFRQLG | |||||||||||||
3 | 4q7qA | 0.16 | 0.14 | 0.87 | 1.04 | HHsearch | ELTWVAIGDSITYVSKGYLTRLNEILNLKYINQGHNGWTSGGIAGNIDSL------GLIKADVYSVFLGTN-DWWQGRPV-GKLDDYQHDNGNTTVYGSFRIIISKIRQL------NPE-----------AKIVLITPNGQTLEEFANAVLTIGRYEQIPVVDLYHHPLLTLRNVNPKNGKYVNYPFNPPPAAVNLTYDGLHPSD----KGNAIIASALADVFRQLG | |||||||||||||
4 | 3cinA | 0.08 | 0.07 | 0.83 | 1.00 | DEthreader | MVKVLILGQ------GYVASTFVALIKIVGSYDVGVHLGLEDMLKEAVDTLVKEWTELD-PDVIVNCTTEAFVP-FGNKEDLLKAIENNDK--ERLT-ATQVYAYAAALYANKRG--------------GAAFVNVIP-------TF-IANDPFVELAVVFGDDGA-TGATPTAL--VKDVAQ-F-NIGGFDKNKHYIKPTGYLGDKKINDSPALGGLLVDLVRLGK | |||||||||||||
5 | 1p1jA | 0.06 | 0.05 | 0.81 | 1.00 | DEthreader | EKLGIMLIGL-G---GNNGSTLVASVLFVVSGWDINNLPSIINKTHLQRIRRDIQNFKELKVIVLWTATERYV-EVSPVNNLQSIKNDH-----EEIAPSTIFAAASIL-EG------------------VPYINGS-----P-QNTFVPLVLAEHEGTFIAGDDLKSGQTKLKS---Q---I-SYNHLGLSPKRSEIVIKYMKGDSKCEDSLLATPLIIDLLVMTE | |||||||||||||
6 | 4nrdA | 0.17 | 0.12 | 0.71 | 1.29 | HHpred | ------QQTDVTSVKQTWWHKFIKENNYRCVNNSFSGATICNTGYNQSDRSFITRDKLGCPDIIFIFGATN-DCWAGSPLGDYKYEGWTKEDLYTFRPA-AYLLDHI-------DRYP-----------NVEIYFLLNSG-LKEEFNESVRAICNHYNIDCIELHDIDK-----------------------------KSGHPSIKG-EQISEQIK----FRK---- | |||||||||||||
7 | 4la4A | 0.09 | 0.07 | 0.70 | 0.62 | DisCoVER | PTKIQIVFYSSYGHIYKMAEAIAAGAEVTLLQVPEYRAAFIPYA--TP-EVLA----E--ADAIIFGTPTRF-GN-------------M------CS-QMRNFL-DQTGGLWMSG------GL-----IGKVGSVFTSTAGGQETTITSFHTLL-HHGMVIVGVPYGLSGG----------TPYG-A------------STLAGRQPSENELQIARFQGKHVATIA- | |||||||||||||
8 | 3bzwA | 0.18 | 0.14 | 0.75 | 0.40 | MRFsearch | --KVGYIGDSITDNIKKYWDFLKEWLGITPFVYGISGRQWDDVPRQAEKL---KKEHGGEVDAILVFGTNDEQVLSAHGEKKVTRKKRTPVTQDTYRGRINIGITQLKKLF-----------------PDKQIVLLTPLGEYIDAYVQAIKEAGNIWGIPVIDFNAVTDAGYDRLHPDT-----------------------------------KGQERARTLYQLL | |||||||||||||
9 | 4q7qA | 0.13 | 0.11 | 0.88 | 0.83 | SPARKS-K | ELTWVAIGDSITRVSKGYLTRLNEILPNKYINQGHNGWTSGGIAGNIDSLGL------IKADVYSVFLGT-NDWWQGRPVG-KLDDYQHDNGNTTVYGSFRIIISKIRQLN------PEAK----------IVLITPQRNDTLEEFANAVLTIGRYEQIPVVDLYHHPLLTLRNVKNPKNGKYVNYKYPNPENNEYVNLGLHP----SDKGNAIIASALADVFRQLG | |||||||||||||
10 | 5xtuA | 0.10 | 0.09 | 0.88 | 0.63 | MAPalign | EFRITNFGDSLSSNGPVWTEYLAGFLKPTNWAVGGAMSGLTNTGQQIK-LRIANKGQFTGNELVSYMSGT--------NNLWFTLFGDLDQTGNKAAGFALTDIETLID------------------AGAKQVLAANIPDRFIQSHNQALKAGLDQLDVEIYYFAFDLFNKVSNEVKTKGKYTLTNVTGEAYSYATGKVINLFWLHPTTAMHKIMAKEAASLVISGR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |