>PF16442 (203 residues) LQEMEKSLSAINEELNQKTKEYSWQLVSAYADYCEANNKYISWNDVPYLQEIVEYNRPAS LENYRLEHKVCKDALDKFLNTYKEYRELKKRQSEAVSKEEKDAVSAAFSAFWKKLRSEDN AYKELYYAERKTVCKYRSEALRYMIEQYKKDNKAVSTSMIKYSDRSYLLQKGSALELLDK EVNALESVQRELVRKITRAKYGL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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Seq | LQEMEKSLSAINEELNQKTKEYSWQLVSAYADYCEANNKYISWNDVPYLQEIVEYNRPASLENYRLEHKVCKDALDKFLNTYKEYRELKKRQSEAVSKEEKDAVSAAFSAFWKKLRSEDNAYKELYYAERKTVCKYRSEALRYMIEQYKKDNKAVSTSMIKYSDRSYLLQKGSALELLDKEVNALESVQRELVRKITRAKYGL | |||||||||||||||||||
1 | 5c21A | 0.11 | 0.09 | 0.82 | 0.75 | DisCoVER | M-ASK-EI--KP--IENSIVKEIIVKEGESVRK---G---DVL--LKLTALAEKYQKELNLDKKRAERLTILARINRYENLSVEKSRLDDFRSLLKQAIAKHAVLEQENKYVEAA----NELRVYKSQLEQIESEILSAKEEYNEERQQ---ASVI--RA----P--VS--G-KVQQLVHTEGGVV-TTAETL--MV-IVPE- | |||||||||||||
2 | 2q6hA | 0.05 | 0.04 | 0.86 | 1.00 | DEthreader | IPLMWIEWAMGTTGFGLWIPLVVAIYYVYIESWTLGFIKLYI---------------IEFAKIAMPTLFILAVFLVIRVFLLETAADGLNFLWTPDVWAAVQ-GISIPAALGTLPAIQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLAWTAAIVFF---S-AHLVMFL-NKSLDEMDFWGTIGVV-G------VP-IY | |||||||||||||
3 | 6ek7A1 | 0.07 | 0.07 | 0.94 | 0.59 | CEthreader | WNDVEQAVLQQSLDLDIAAKNIISTGNEIINLINQMPITLRVKTLLGDITKDILDDMKGDINRHQTTTENVRKKVSDYRITLPQVKTKYDLMEKSNLQTALEALSLSFSDIGIRMVDAESALNHLDFMWLSVLNQITESQIQFAM---------INNALRLTSFVNKFQQVITPWQSVGDSARQLVDIFDEAIKEYKKVY--- | |||||||||||||
4 | 4fzsA | 0.06 | 0.05 | 0.83 | 0.72 | EigenThreader | DIWFEEKLQEVECEEQVNHRKELALNTASLAMLGSSLSRALSQLAEVEEKIEQLHQEQANLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLKPDKLQQAKDEILEWESRVTQ---YERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEA-------------------------------- | |||||||||||||
5 | 6gmhQ | 0.15 | 0.11 | 0.78 | 0.44 | HHpred | ------------------HVQEDYDQAFQYYYQATQFA--SSSFVLPFFG-------LGQMYIYRGDKENASQCFEKVLKAYPNNYETMKLYAASEDQEKRD---IA-KGHLKKVTEQYPDDVEAWIEIQGALSAYGTA-----TRILQEKQADVPP---------EILNNVGALHFRLGNLGEAKKYFLASLDRAVTTSYNL | |||||||||||||
6 | 6f1tX | 0.16 | 0.14 | 0.90 | 0.45 | MRFsearch | -QDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREG-----------------EWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSNQRLLDQLSRASEVERQLSMQVHALKEDFREKNSSTNQIRLESLQAEIKMLSDRKRELEHRLSATLEENDLL--QGTVEELQDRVLILERQGHDKDLQLHQSQLEL | |||||||||||||
7 | 6djlB | 0.14 | 0.14 | 0.97 | 1.06 | FFAS-3D | LEKLNQSTDDINRELEDARQKFRSVLVEKLDELVKKIGKAVE-DSKPYWEA------RRVARQAQLEAQKATQDFQRATEVLRAAKETISLAEQRLLEDDKRQFDSAWQEMLNHATMEAEQTKTRSELVHKETAARYNAAMGRMRQLEKKLKRAINKSKPYFELKAQLEQLKKTVDDLQAKLTLAKGEYKMALKNLEMISDEI | |||||||||||||
8 | 4uosA | 0.13 | 0.12 | 0.89 | 0.81 | SPARKS-K | NEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENG-----------------EDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDS------EKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKEL | |||||||||||||
9 | 5j1iA | 0.08 | 0.08 | 0.99 | 0.69 | CNFpred | APTLRSELELTLGKLEQVLSAIYLEKLKTISLVIRGTQGAELRAHEEQLKEAQAVPTKASLKKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGERDVERWRERVAQLLERWQAVLAQTDVRQRELEQLGRQLYRESADPLGAWLQDARRRQEQI--VREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQL | |||||||||||||
10 | 5i6xA | 0.07 | 0.06 | 0.84 | 1.00 | DEthreader | --------ALGQYH-RNGCIIWIGYAICIIAFYIA---SYYNTI--------I--VSGKVVWVTATFPYIALSVLLVRGATLPGAWRGVLFYLKPNKV-DVSEVAKDALITYAEAIANMPASTFFAIIFFLMLITLGLDSSFAGLEGVITLFVVVTCSVLEEYATGPAVL----TV-ALIEAVAVSWYGITQFCRDK--FS-- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |