Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | DRIEGNSSTFEFIKSLYGIESVTNVTDTGNVPAVTAEEMEGVLEALRQNGNITHECKSENVEGYFGDGGDRQSVKMTAEYQARTRAGAYLEEFALCVSLNFNVDKNTVYYIGTTYSSSADLFTWKGYGASLSTTAGGGNVFTAITHLYFRVSDQENCLVKVPVDFKGNYDFNTGCGTYNFAL |
1 | 4lebA1 | 0.10 | 0.07 | 0.74 | 0.64 | DisCoVER | | -GKTITG--------VFNSFNSLTWKGPGTPTWNAV--LG-WS--LDGTSASPGDTFTLNM--PC-----VFKFTTSTSVDLT------AHVKYATCQFQAGEEFM-TFSTLTCTVSNTLALGTVTLPLAFNVGGTG-KCFTAGTNTVTFND--GGKKISINVDF----------------- |
2 | 5jxfA | 0.04 | 0.03 | 0.77 | 0.83 | DEthreader | | GMWLNEMK-NLGM---------DIYSVNHSSLKAV-PHFCTSNHCGFDAIQNHLPNELVVTEAWQENVTEVFKDVRLVGAPPIKFGSDTDNRTGDFSMFRYIPK----HFL------SAGNGGSSPAVDAQG----------N-LIGLNFDRTMSDRNVMVDMRLKHL-------NEMKL-- |
3 | 3edpA | 0.06 | 0.06 | 1.00 | 0.70 | CEthreader | | PLFEVIASKIKDSINRDEYKTGPNETALQEIYSSSRTTIRRAVDLLVEELYVQPKLTAQNILETGVKNLKKDIKDFYIRKAGKFYAEIFGKENELVYSIKFVQKSEHGATLDRLILPLGLYPDLQAKDFQIINIIFELEQELQLILAGNEQIKNHLNENDPVFKLSSVFYAENDPIAIQYHY |
4 | 2o4vA | 0.04 | 0.03 | 0.88 | 0.83 | EigenThreader | | NP----------------VNLKFGRFSKWVTALERN--LTYDIADWVNDNVRYNLRGVFAPLHEP----GNVVHLGLQYAYRDLEDSAVDTLWKVWGLEGAWALGAFSAQAEYLRRTVKAERASGYYAQLAYTLTKEIGALFYRYDSIKVEDDNIGDAKGKTHTLGVNWYANEAVKVSANYV |
5 | 4r1oA | 0.09 | 0.09 | 0.94 | 0.34 | HHpred | | DNMREVAVDKVGAQIQFGWSVNGYGDLVQYIRDVSEQKVNELLDEYEELYDIVPAGRAFTTEDLHGMEGDWKTAALVRLMKVMAKGTSFMEDYT------YHFEPGLILGA-HMLEVCPTIAAT---RPRVEVHPIGGFDGGEGAAVNASLIDLGHRLIVNEVDAVKPHMPKLPRILWKPR- |
6 | 4fe9A | 0.13 | 0.10 | 0.75 | 0.58 | MRFsearch | | --------------------TIPFSMTEDHVFKVALAQLDSVTQEAYKS-----------------RASVVRELKISINASAVTPSGEGIQLVGNEVSITLQPAPDGYYIVGD-------FTGWDGNSQQMKKDALDENLYILEAEINFKIFPAGAINTALDGKIKISFDAF--NYRFTVKD |
7 | 6wadA2 | 0.13 | 0.10 | 0.82 | 0.44 | FFAS-3D | | --LEWRLGFWSQVKQHYGV------------------DMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLGGRFRCSCYGSAPMHGFAIWFQVTFPGGEKPLVL---STSPFHPATHWKQALLYLNQVEQDT----DVSGEITLLPSPRRLRVLLRYKVGD-----QEEKTKDFAM |
8 | 3knyA | 0.10 | 0.08 | 0.86 | 0.65 | SPARKS-K | | VSEKVTPKEYELWRTSSRYEINYSFLKKD----ISEKRKKEIYDCINNICERIEKGQINKYEGFDEDGTAEYKTNGCTLYTHS-------LGPYIKAAVTYKKSDDDVTITSSSVYTGSPNDPSFSGASSVSYDKDKKL-IAASCSGTLSFKDGSR---KVEVTVQKTGFIP---------- |
9 | 6i96A | 0.08 | 0.04 | 0.57 | 0.83 | CNFpred | | ---------------------------------------------------------------------DDFDRTQRMFGYQLEHR----DVWSARQNFRYLDSD-VDLSQVYAYGWSPNKLNRYFSGAREHLQ-----AYIVDNMLQAEFATARHTLLTGLDYQRRRTVVDWRSGSASALD |
10 | 6ofrA | 0.08 | 0.07 | 0.85 | 0.83 | DEthreader | | LLRVKISSPYQNAYLSTNNLNPAN---SATNISGMS--QGYYLDVLAKIAGLSRRQSDITRADYVSNDIVGRAQYKNVIDTALS-KFTDLTLKYTGSSRDYNTSFPQSDREMGNKSYGLWDHISDY-TRHDHDITYG---GLGHISQAVDNYTYIYSDAWTERHN----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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