>PF16432 (210 residues) AACSNDDEPGIDKGGQKGELIDAISIAFTSSSAPATRADKGEIEGVGTENNVYVAYLFAK ENDPQHEGAKVGDWTVKRVAGDSNTDDKDVAAAIGEGDVATPGTKKNMCTFNGVRQGDSV YVVVNDPQMTLATAQTLAHQGDKSEAAIRAYISNLSKSYLNDLTVTKDGTQGKKYIMAGV SAIPTNPNIPNGSTVKVSIPLNRELAKVFF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | AACSNDDEPGIDKGGQKGELIDAISIAFTSSSAPATRADKGEIEGVGTENNVYVAYLFAKENDPQHEGAKVGDWTVKRVAGDSNTDDKDVAAAIGEGDVATPGTKKNMCTFNGVRQGDSVYVVVNDPQMTLATAQTLAHQGDKSEAAIRAYISNLSKSYLNDLTVTKDGTQGKKYIMAGVSAIPTNPNIPNGSTVKVSIPLNRELAKVFF | |||||||||||||||||||
1 | 2eidA1 | 0.06 | 0.04 | 0.65 | 0.64 | DisCoVER | SAPIGSA-ISR-------NNWAVTCDS-AQN-ECNKAIDGNKDTFWHTFYPKPPHTYTIDMKT--TQNVNG--LSMLPRQD--------------------------------GNQNGWIGRHE---------V--YL--SSDGWGSPVASG------SWATKYSNFETRPARYVRLVAITEANGQ-----PWTSIAEINVFQ--ASS-- | |||||||||||||
2 | 5injA | 0.07 | 0.05 | 0.71 | 0.67 | DEthreader | LLGDAT--L-LCAGLTEDT-YTLISLPPSRTF--D---------------DHTPVEFSLAF-LPGR-A-PHL-RVLVEPGCSSGDENGLALWCALVKVYLNPVLADGFPFLAL---------ALTLHVPVRYVHDEARDRVSAALDRALAAVSPRPLSDGVGLAYLALVHPTRVTVYVSSEEV---R----------------------- | |||||||||||||
3 | 1im0A | 0.09 | 0.08 | 0.88 | 0.61 | CEthreader | TSDLNKEAIASYDWAENARKDGPNSVLGASYTQKSNSEESSPFRETNYEPQLFLGFATDYRFAGWT-LRDVEMGYNHDSNGRSDPTSRSWARLYTRLMAENGNWLVEVKPWYVVGNTDKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESNFNQTRVGVGVMLNDLF------------------------ | |||||||||||||
4 | 4csu9 | 0.07 | 0.06 | 0.87 | 0.57 | EigenThreader | -------------VDEASILVVAGDGGNGCVSFRREKYIP------KGGPDGGDGGDGWMEADESFRAERGQNRGKVIDQGTGQRLLVAGGWHGLGNTRFKSTPRQKTNGTPGLELLADVGMLGMPNAGKSTFIRAVSPKVADYP---------FTTLVPSLGVVRMDNEKSFVVADILIDIDPIDGTDPRWLVFNKILDKVEAEEKAKA | |||||||||||||
5 | 4gpvA | 0.19 | 0.12 | 0.67 | 0.58 | HHpred | -------------NNVPGE-QAVLTIKLKGDGD--PAT-D------TEDAVINNYLVFLFREGGALDCAPYEG------SS--N------------A-----AATITTGT----TAAKKAYVVANTGAL--AG-GLFAT-----VKTETDLLA-----VTGSLDNT-DSTQTKTNLWSGESEVK----FNGGTNAQVTVSLSFVAAKIQL | |||||||||||||
6 | 4gpvA | 0.22 | 0.14 | 0.65 | 0.65 | MRFsearch | -------------------EQAVLTIKLKGDGDPATDTEDAV-------INNYLVFLFREG----------GALDCAPYEG---------------------SSNAAATITTGTTAAKKAYVVANTGALAG-----GLFATVKTETDLLAVTGSL-------DNTDNASTQTKTNLWSGESEVKFN----GGTNAQVTVSLSFVAAKIQL | |||||||||||||
7 | 4rdbA | 0.19 | 0.13 | 0.70 | 0.42 | FFAS-3D | -----------------GD--RSIEISIRVDDFTKTGERYERNQGSAAERLITNLYLLLFDQS--------GANPAKYYITGNTFTGGT-------------WLPDDKVKLDTQSEAGEVYVVANVDNAVKTALDAVA-----------------NESDLQTVKRTTASTDIASPFLSGNKTHDFLAN-----RLLDNVPLVRAIAKV-- | |||||||||||||
8 | 6h9cZ | 0.13 | 0.12 | 0.92 | 0.64 | SPARKS-K | GLLGSSKTTASNQTAPQRE---TAIISFEVPR----KFS--EIEYVGQRDAT-RFVPRTTEEITGTANDDTLQANIQPIAGEEDMDYPVVVAYNVTQGAQVENYATDEVTLATPADGDTVKLIMGDGEVQFRLVNQFGQEEYPWATPLYRWHDFPQLKRGREINVTWQENETVEVLLAPQAITWEDADYPEGSTFEQDVEITL------- | |||||||||||||
9 | 3up6A | 0.17 | 0.12 | 0.70 | 0.76 | CNFpred | -------------------TRAQLSIDLVNN---------VEQQE---KINSMRFIVFGSTP-------GGVRLDVNEHIL--------LSTPETATDI-----DAQLLEVTSS-NDILVVVIANEPQSLTSQLDGIA-----NLLTLQEMIYDISSILNSDGQIIS----ATGMPMTGVIRDI---SIAPDETKTVQMVIERAVARVDV | |||||||||||||
10 | 5l43A2 | 0.10 | 0.08 | 0.73 | 0.67 | DEthreader | GLSSAIPLVGQLRWDWSFAEG-FLVGVFAALYGITFTERVFEV-FNEDG------------------GGAWNLNIAKP--P-AGEPTLMEMEFGHALHGLSYPSGTAV----------------FVEYPSQVNEM-W-------WPSV-A--DRMLKSQKYNQGYVELKLVPPRYIEDA-VFGL-L--RENGDTFFRREPLLDRRGL--- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |