>PF16425 (279 residues) YTQATEFEGIQKSAGNSYAMEVSLPGEEKTGYQPVVRMDIDLTDTQAVADVLSLDALPDV IKEEISAARDSAMESGAQEATVTLFAPSEFTIDYKDRNDPITPSEDLPRSDDKIYYTYQG SEMVSVKIYWDNKKSDPYVLAEGEQTKAFAAALTEIAVSGVLGNPVFEVVETGYSILQAF MDLVGVANMDNVMITSEDALQVTFHHNLIAQFTFTKVGNRWHHGLTTKQLKLLRIEYFQK YDVEVSPGHYVEKEDTITETYNRILTTPYFDDPWQTAKA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | YTQATEFEGIQKSAGNSYAMEVSLPGEEKTGYQPVVRMDIDLTDTQAVADVLSLDALPDVIKEEISAARDSAMESGAQEATVTLFAPSEFTIDYKDRNDPITPSEDLPRSDDKIYYTYQGSEMVSVKIYWDNKKSDPYVLAEGEQTKAFAAALTEIAVSGVLGNPVFEVVETGYSILQAFMDLVGVANMDNVMITSEDALQVTFHHNLIAQFTFTKVGNRWHHGLTTKQLKLLRIEYFQKYDVEVSPGHYVEKEDTITETYNRILTTPYFDDPWQTAKA | |||||||||||||||||||
1 | 4b6at | 0.07 | 0.05 | 0.79 | 0.52 | DisCoVER | TAGQIAQTALVTINVPLCTDFILRLERGIAIPTTIDIDQIS---------GG---WCP--EIDD--VTG--TL----RPGDLVKITLGVH---------------------------IDGY-TSEVSHTMVIYPVDQPTGPLLGGKADAVAAAHIAMVVLSSGITGQLIRTIVDGVRVRRIRRFLAGQNEGIVASGEVYLIDLKMASAGELGAYVRDFG-VYPFKPIQIATLVARECNTIVLCDSSDRPELL---RLTGGSKTCPWIHSQHELN----- | |||||||||||||
2 | 3w5mA | 0.03 | 0.03 | 0.72 | 0.67 | DEthreader | AVASALLAPGWTDKRVQY-GWLLSGETVRIAV-------RSAAATFHGFVMHTSAFITWGQGNTDT-PAR--------DERLGWTINAP-AAYTM-----------ESARFL----------------VAAVGNLGNGGGDALPSVHALRYLEHDGYGDWLNVSDETPKDVIATAYFAHSADYTDLTRRKQYVKGDTQSAYVL--------SMNLVAARLV--------------FLGTPLLPLTDTHVALLHQRSWWERHA-----------PGRAYV | |||||||||||||
3 | 2nn6B | 0.08 | 0.05 | 0.71 | 0.51 | CEthreader | GELRKIQARMGVFAQADGSAYIEQ---GNTKALAVVYGPHEIRRALPDRALVNCQRKSCEMGLQLRQTFEAAITQLHPRSQIDIYVQVLQAD---------GGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAAGGPQLALALLPASGQIALLEMDA-----------RLHEDHLERVLEAAAQAARDVHTLLDRVVRQHVREASI--------------------------------------------------------- | |||||||||||||
4 | 5vkuL | 0.07 | 0.06 | 0.93 | 0.57 | EigenThreader | DFYKVGNITLYTELHPFFDFTHCQENSETVALCTPRIVIGYPELCYLVDVLVHGNVDAFLLIRTFVARCIVNMFHTRQLLVFLGLNPAATPEDSIAADVATDAHTPGEHVKVLEVRAPLFISRQHVLYNLPVPFHRFYS----NPTICAAHYHRHDGGEYHNWLRSPFSRYSASVMTLAAMQTKAHIHPGFALTAV---RTDTFEVDMLLYSGTSVKEERINTVDMNTCVAYVNRVRTDMGVRVQDLFRVFPMN-------------VYRHDEVDRWIR | |||||||||||||
5 | 4zxsB | 0.13 | 0.03 | 0.25 | 0.30 | HHpred | ---ACDPRLLFYPDPGGHMLYVIFPGTSQSTFVLVVRRNAPTVSAADIYCKMRDISFDGGLMLEYQRLYATFDE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1nhjA | 0.11 | 0.07 | 0.63 | 0.37 | MRFsearch | ---------------------------------------------QLANQIAAGEV-VERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDATSKIASLDDLE---AIISLGFRGEALSRLTLTSRTAQEAWQAYAEGRDMNVTVKPGTTLEVLDL----EKTEFNHIDEIIRRIALAR-------------FDVTINLSHNGKIVRQYRAVGTAFLEQALAIEWQHGDLTLRGWVA------------------------------------- | |||||||||||||
7 | 7c50A | 0.11 | 0.07 | 0.60 | 0.49 | FFAS-3D | -----------KTLERS----VSVKGLSQKEVEAPIKFTRSNNNLTNLY---------EELEQDKENIIKFLKEQGVKEDEINY---NSPNIIDRLSDPYSNDTQAAY--------RYIGTANLLIYT------------QNVKLGKSILENISSLAKFGIIKPQIEEATLNARNAAI---------KLGKIKKASQGQFSINNRDK--------------NTPYIKTIRVVSTIEYY----------------------------------------- | |||||||||||||
8 | 2wb7A | 0.09 | 0.08 | 0.89 | 0.59 | SPARKS-K | KVHITEVTAYVIDENNRTYWTRVWNSSTRQGGYIADTLDLVTPLVYQIRDAIVTGQIS-------RELYDKIWNTSTTHFEIRVIVKGYQEAWKTDSSVSNQSSCPSDGHWYEACWVHDKDIDFTLKAET---TTAWGHVTGTNDVATI-----------DGGLGSLPI---------KFLQLSGKWVQNKYAGALSDFIIITAALNSTAKFLITPNPGYFQPANP--KISDEYRFVTLRVIEGGRELADTTTGHIGDLTEPTFFGLTHYTDAPGTLDY | |||||||||||||
9 | 4dn7A | 0.07 | 0.04 | 0.61 | 0.65 | CNFpred | ----------------PVQTCLMLG--KKAAQTVHNIIIVE------------------------------------EGATLDIITG---------------------------CTTK-EEGLHLGISEMYIKKGGTLNFTMIHNWAEQIGVRPRTVVSVEE-GGTYVSNYICLKPVRSVQTY------PTVRLEGGAVTRLNTIAIALDLGSKAIFNAPGTRAELISRTITGRLIARGEMIGNA--------KGAKGHLECKGLVL------------ | |||||||||||||
10 | 6xs4A | 0.05 | 0.04 | 0.65 | 0.67 | DEthreader | WLAANCAIPKTFW---ALQLCYFILILQIEVSFAMDQQKLVNGEPMDHDEVIPEFIKLGVEK--ED---------------AYDYA-A--IG-C-I-----------------ETAVGGKWGYRTMFINFARML--EALSGNFGNFDEVMTAWDTQRTRIIEYVVD----------------------------------------------LCSAL--CIAKSIQGDWVSGLQVILGLAAVLVIQLQRNGAPKSVLLRATDEKQYHRYGRGPI----- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |