>PF16394 (320 residues) KIFDEEGVEINELKVGYQHFSKFSVQANFRFAATNLPGWVELEGGSLVGPVNQKVSGGLK IIEDDNREKYPVPASDKNVITFSDEEGKAFYSFNVSYDGMTPGVLEMTLPSSNKYDWAVS LDGKTFTQSAGGVAGTGGSTTTLKNRVPFTVKTLNDDYEVVFVEKGSNNNDLYIMDASYN EWMRCEREGGKATLIVDEYTPASYEPAERVGYVLVFSRAQYEDIKDNLEATIIDGEDLVY KYEQSNLVLQFTQKETKGGGDELAITAVDGQTYNPIDCTSYTGGDADYFKSEYGVTGIFE IKQPASVATVAKMPFNWSNS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KIFDEEGVEINELKVGYQHFSKFSVQANFRFAATNLPGWVELEGGSLVGPVNQKVSGGLKIIEDDNREKYPVPASDKNVITFSDEEGKAFYSFNVSYDGMTPGVLEMTLPSSNKYDWAVSLDGKTFTQSAGGVAGTGGSTTTLKNRVPFTVKTLNDDYEVVFVEKGSNNNDLYIMDASYNEWMRCEREGGKATLIVDEYTPASYEPAERVGYVLVFSRAQYEDIKDNLEATIIDGEDLVYKYEQSNLVLQFTQKETKGGGDELAITAVDGQTYNPIDCTSYTGGDADYFKSEYGVTGIFEIKQPASVATVAKMPFNWSNS | |||||||||||||||||||
1 | 4u48A4 | 0.09 | 0.06 | 0.63 | 0.93 | DisCoVER | RALNL---TAQKTPLAPADEVKFSVVGGNTLQGQLFGNLSRLDEVQLTLDKGGRGEVSAASQWQE--AHSPLQV---ILQASLLESGRPVTRRVEQAIWPADTLPGIRPIVDEDNAAFDI------------------------------VYANAEKKAVSGLQVRLIRERRD--------YYWNWSESEGWQSQFDQKDL-----VEGEQTLDLNAD----------------------------ETGKVSFPVE-W------------------------------------GAYRLEVKAPNETVSSVRFWAGYS-- | |||||||||||||
2 | 5ntfA | 0.08 | 0.05 | 0.70 | 0.67 | DEthreader | --RSCVNFETNVEFTDVDAYK---------------STFVVILGT--------------LPFYGVKNAVTKVD------ASAKRN-KDNCVRLTVVAPNPSSELAVV---------ATST---QLCQRLVDAPT-----NLLNTATFVAYAK-L--GCAV--------------GYGGIYGPRLVTLSYK-L-GGIVYDSGGLLKMMKDMGGAVGFPIELS-----SLGDGVFHAHEISFKPDV-LVDM-ATL-TGAQGIATAGIFVEEELSFLGTCFPVVQVNNASVSCAGQFD-AFPAFGLLTEYL------------ | |||||||||||||
3 | 3fbqA | 0.09 | 0.07 | 0.76 | 0.70 | CEthreader | MTRESNGVKVTINDVISDGSITYSLESEQDLGDDPIILGGLDIMDGKMTKVTEKKYVGMVTTTHHDSNKKDKVNFRWNIEGIEIPDRKKSIQGHWNFALT----VKSMDSKERTIGGSSEKEGIKANMEKVAMSPVS-FILYYNQEVSKGARKEWDSVDVELTVKDDLGNDYSGEGNG------GSGNDPYNIRWSATFQKLNENATKLIVTPRVHLRVHGGVEYVNGKEKKIEVPNKEAKKKDIVLDDIVIDLK----------------------------------------------------------------- | |||||||||||||
4 | 4jdzB | 0.06 | 0.05 | 0.79 | 0.80 | EigenThreader | ----SKNVNDLTVVDVPAQDYLALKSQIKVDKYSDT--VQVHDTANTFTDNSVQMGINYSIYMD--------ADTIPVSFNVTIG--NDTTKTTANIQYP-DYVSRD--------NNSIGS----AFTETVSHAGNAEDPGYYKQ--TVYVNPSEKSLKLKVEAYHKDYPDNVGQINKDVTDSVNVDFGSYVVMVDTKFEYTTSASPTLVQMATLTSD-----------------------GNRSVSTGNALGFTNNQSGGVTVVAYDNAAAAEVGRT-ITDDKG----------GY-LIPNLPNGDYRVEFSNLPQGYE | |||||||||||||
5 | 6npsA | 0.15 | 0.11 | 0.72 | 0.44 | HHpred | -----------VNTLLVDFLASFTIEKKAEYHISTDQDWLSCS--AANGVLDLSETIHVFV--D--RDGLADQA--EGRITVKTPVGKVTIVVPVVNNDFTKGYISIEAE---HFATQKATTLNRFEV-LDGYGKTLSAIKAF----PTDTHYQ---------------------VGKDAPFVEYHFEAGVYELEFYLQPSNPVEGTMYAGI--Q--------VNENDVDVIPDGPHWGIDVINNIRTTKTKI-TCEQGLNKLRIYAVSPGF--ALEKVIYPDGLANSYLG----------------------------- | |||||||||||||
6 | 6dlhA | 0.11 | 0.07 | 0.66 | 0.63 | MRFsearch | --------WSRQYTILPAQPYSHNLVETGLTASGTLPAWLTISQWTLSGTPPSNYTFELMAQDSD--------GVTNREVKLEVISYGSLLKLGVDFYDFEGDVLTITKTSG-PDWLVLTQNTWRLSGMP-TAADAGENSFTFNVDTEIKITVDNYTLQLGTDYYDFGDALTITKTS-GPDWLTIQQTDNSWKLSGTPINS----------------------------------------DAGENSFTFNLSDDTNSTTAEILINVIA--------------------------------------------------- | |||||||||||||
7 | 2icfB3 | 0.08 | 0.07 | 0.91 | 0.50 | FFAS-3D | -------------GICVADPFEVTVMQDFFIDL-RLPEQVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTKRRHQQTVTIPPKSSLSVPYVIVPLKTGLQEVEVKAAVYHHKSLKVVPEGIRMNKEDIPPADLSDQVPDTESETRILLQGTELNLDVSLQLPSRSSKITHRIHWESASLLSVVTMYHDLKVTIKPAPETKNGDQDATMSILDISTDDLKQLANGVDRYISKYELDKAFSDRNTLIIYLDK-VSHSEDDCLAFKVHQYFNVELIQPGAVK---------------VYAYYNLEESCTRFYHPEKEDGK | |||||||||||||
8 | 4aq1A | 0.13 | 0.12 | 0.96 | 0.74 | SPARKS-K | NFAIDNGLTVTKATLSDKKSVEVVVNQEYTITATG----IKNLKGETA----KELTGKFVWSVQDAVNNSSLKVGEESGLTVKDQDGKAKVELTSSNTNIVVVSAKVTAVKPGTADVTAKVDGVVLTNTFKVTVTEVPVQV---QNQGFTLVMFAGETKTVAMYDTKNGDPEATVRSLNPIIATAAINGSELLVTANAGQSGKKDNTKRTFTVDVKKEPVLQDIKDATSDEAVGGGEVEGVNQKTIKVSAVDQYGKEKFGTKGKVTVTTNTEG--LVIKNVNSDNTIDFDSGNSATDQFVVVATKDKVEVKYFKNASDTT | |||||||||||||
9 | 2i07A | 0.12 | 0.10 | 0.78 | 1.26 | CNFpred | --------KFVTVQATFG---TQVVEKVVLVSLQ--SGYLFIQTDKTIYTPGSTVLYRIFTVNHK---LLPVG--RTVMVNIENPEGIPVKQDSLSSQ--QLGVLPLSWDIVNMGQWKIRA-----YYE---------NSPQQVFSTEFEVKEYLPSFEVIVEPTE----KFYYIYNEKGLEVTITAVEGTAFVIFGIQD---QRISLPESLKRIPIEDGSGEVVLSRKVLLD-----AEDLVGKSLYVSATVILDMVQAERSGIPIVTS--PYQIHFTKT----PKYFKPG--MPFDLMVFVTN--------------- | |||||||||||||
10 | 3cu7A | 0.06 | 0.04 | 0.67 | 0.83 | DEthreader | ------SVSIEPEYFIGYNNFEITIKAVADVYIT-FGIRMMQTAMQNTMLINGIAQVTFDSETVKYYSLNNKY----LYIAVTVIGFSEEAEIPGIKYVLSPYKLNLVA-----T-------------PLF-LKP-----GIP-YPIKVQVKDSLVGVPVTLNAQTIQETSDLDP-------SKSVTRVDGVASFVLNLPS----GVTVLEFNVKTDAP-DLPE----------------EN--QAREGYRAIAYSSLSQELV--------------N-A-----------TFLTNADDSQ------ENDEPC------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |