Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | YVGLASTIDGLGYEERAAADWMLKNVANSQYVSFEDIRNGNVDLGECKVMWWHLHIDGGIDNMDKFDAAAPAALQALPAVKDFYNNGGCLLLTRFATYYAAKLGATADGNNPNNCWGQVEESGEITSGPWSFFVDGHENHPIYQGLVTTIDGKQGVYTCDAGYRITNSTCQWHIGSDWGGYPTLDDWRNLHGGLDLGYGGDGAVVVWEYPANAAGGRVLCIGSGAYDWYSYGVDASGDQYHGNVAKMTLNAINYL |
1 | 6mtgA | 0.09 | 0.07 | 0.81 | 1.17 | DEthreader | | LILNLM--PKKIE-TENQFLRLLSNSQVDIQLLRIYCNFEDIQDQNFDGLIVTGAP--LGLVEFNDVAYWPQIKQVLEWSKDHV---TSTLFVWAVQAALNI-L-YGIPKQ-T-RTEKLS-----G--VYEHHI-LHPHALLTRGFD------DSFLAP--------HSRYADF--------PAALIRDYTDLEILAETEEGDAYLFASKD----KRIAFVTGHPEYDAQTATPR--ASWRSHGNLLFTNWLNYY |
2 | 6mtgA | 0.09 | 0.07 | 0.81 | 1.00 | DEthreader | | VLILNL-MPKKIE-TENQFLRLLSNQVDIQLLRIDYCNFEDIQDQNFDGLIVTGAPL-GLVEFNDVA-YWP-Q--IKQVLEWSKDHVTSTLFV-WAVQAALNILYGIPKQTRTEKLSG----------VYEHHIL-HPHALLTRGFD------DSFLAP-----------HSRY---A--DFPAALIRDYTDLEILAETEEGDAYLFASK----DKRIAFVTG-HPE-YDAQT--PRASWRSHGNLLFTNWLNYY |
3 | 1t0bG | 0.14 | 0.11 | 0.75 | 1.04 | HHpred | | ----EFRHEKKDEQHTVIASYLAEAGFDAATAVLDEGL-TDEVLDRCDVLVWWGHIA----H-------DEVKDEVVERVHRRVLEGMGLIVLHSGHIFKKLMGTTCNLK-----WREA---------DEKERLWVAPGHPIVEGIGP------YIELEQ---EE--------------MYGE--FFDPEPDETIFISWFGGERSGCTF--TRGKGKIFYFRPGHET-YP-------TYHHPDVLKVIANAVRWA |
4 | 1t0bG | 0.13 | 0.10 | 0.76 | 0.90 | DisCoVER | | RVVVWNEFRHE-IYPEGMHTVIASYLFDAATAVLDEEHGLTDVLDRCDVLVWWGHI-----------AHDEVKDEVVERVHRRVLEGMGLIVLHSGHFSFKKLMGTTCNLKWREAD-----------EKERLWVVAP-GHPIVEGI------GPYIELEQEEMYGEFFDIPTIF---ISWFEG--------------GEV--FRSGCTF-T-RGKGKIFYFRPGHETYPT--------YHHPDVLKVIANAVRW- |
5 | 2gk3E | 0.13 | 0.10 | 0.78 | 0.57 | MRFsearch | | ------TSSKYEEGATWLLECLRKGGVDIDYPAHTVQIASIDELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLIGGKNTVLAEVLPVILDG-------------DDRVEKPEGICAEAVPEHPVVNGFSD----YPVFLGY-------------------------NQAVARDDADVVLTI-NNDPLLVFGEY--QQGKTACFSDCSPHWGTQQ------FSWPFYTDLWVNTLQFI |
6 | 2gk3E | 0.10 | 0.09 | 0.85 | 1.10 | SPARKS-K | | KGYDSFTSSKYEEGATWLLECLRKGGVDIDY-PAHTVQIAFPELNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLIGGYLSFGIEAKANYKNTVLAEVLPVILDGDDRVEKPEGICAEAVSPEHPVVNGF-----------------------------SDYPVFLGYNQAVARDDADVVLTINN-DPLLVFGEYQ--QGKTACFSDCSPHWGTQQFS------WPFYTDLWVNTLQFI |
7 | 1t0bG | 0.14 | 0.11 | 0.76 | 1.08 | MAPalign | | VVVWNEFRHEKDEQVRAMHTVIASYLFDAATAVEHGLT-DEV-LDRCDVLVWWGH-----------IAHDEVKDEVVERVHRRVLEGMGLIVLHSGHFIFKKL-----------MGTTCNLKWREADEKERLWVV-APGHPIVEGIG------PYIELEQE-EMYGEFFDIP------------------EPDETIFISWEVFRSGCTFT--RGKGKIFYFRPGHETYPT--------YHHPDVLKVIANAVRWA |
8 | 1t0bG | 0.13 | 0.10 | 0.80 | 0.90 | CEthreader | | KKDEQVRAIYPEGMHTVIASYLAEAGFDAATAVLDEPEHGLTDLDRCDVLVWWGHIAHDEVK-----------DEVVERVHRRVLEGMGLIVLHSGHFSKIFKKLMGTTC----------NLKWREADEKERLWVVAPGHPIVEGIGPY------IELEQEEMYGEFFD-----------------IPEPDETIFISWFEGGEVFRSGCTFTRGKGKIFYFRPGHETYPTYH--------HPDVLKVIANAVRWA |
9 | 2gk3E | 0.12 | 0.10 | 0.85 | 0.84 | MUSTER | | SKGYSFTSSKYEEGATWLLECLRKGGVDIDYPAHTVQIAFPESLNRYDVIVISDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLIG-GYLSFGIEAKANYKNTVLAEVLPVILDGDDRVEKPEGICAEASPEHPVVNGF-----------------------------SDYPVFLGYNQAVARDDADVVLTI-NNDPLLVFG--EYQQGKTACFSDCSPHWGTQQFS------WPFYTDLWVNTLQFI |
10 | 2gk3E | 0.13 | 0.11 | 0.82 | 1.85 | HHsearch | | FIGESWHSSKYEEGATWLLECLRK-GGDIDYTVQIAFPESIDELNRYDVIVISDIGSNTFLQNE-TFYQLKIKPNALESIKEYVKNGGGLL-IGGYLSF----GIEAKANYLAEVLPV-ILDGDRVEKPEGICAEVSPEHPVVNGFSDY----P---VFL-------------------GYNQA---VARDDADVVLTI-NNDPLLVFG--EYQQGKTACF-SDCSHWGTQQ------FSWPFYTDLWVNTLQFI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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