>PF16314 (655 residues) YRPLTQEEIITLKKQNCTATDWNHIKVAPHFTTDYISNVRFSGDIYLGEFSQSFHLDGGL CKHSGIYYATLHNCRIGNNVLIENIPNYIANYTIGDDCFIQNVNLIVVEQKSSFGNGTPV SVLNETGGREVPIFNELSAHLAYIIALYRHLPVLTEKLKRLIDRYTEKHSSETGSIGRGV TIVSSGSIRNVIIGDKCTIDGASRLKNGTINSNETAPVYIGHNVVAEDFIIASGTSITDG ATLVRCFIGQACHLGHLFSAHDSLFFSNCQGENGEACAVFAGPYTVTMHKSSLLIAGMFS FLNAGSGSNQSNHLYKLGPIHQGIVERGSKTTSDSYILWPAKIGAFSLIMGRHVNHPDTS DLPFSYLIEKNNQTYLVPGVNLRSVGTIRDALKWPKRDKRTDPCKLDYINFNLLSPYTIR KMIAGIEVLHSLRSVSGETSEEYSYQSARIKNSSLEKGIVLYAKAINKFLGNSLIKRLEN IRFRTNEEIRSRLKPDTSKGAGEWIDLAGLIVPQKEIENLITAIENGEIDSVEQICSFLE ALHRDYYTLEWTWAWDTIQKWYDISPDSITAQDIIRIVNIWKEAVISLDEMLYNDARKEF SLMAQTGFGVDGTNHQKQMDFEQVRGDFESNPFVETVRHHISDKTALGNELIERM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | YRPLTQEEIITLKKQNCTATDWNHIKVAPHFTTDYISNVRFSGDIYLGEFSQSFHLDGGLCKHSGIYYATLHNCRIGNNVLIENIPNYIANYTIGDDCFIQNVNLIVVEQKSSFGNGTPVSVLNETGGREVPIFNELSAHLAYIIALYRHLPVLTEKLKRLIDRYTEKHSSETGSIGRGVTIVSSGSIRNVIIGDKCTIDGASRLKNGTINSNETAPVYIGHNVVAEDFIIASGTSITDGATLVRCFIGQACHLGHLFSAHDSLFFSNCQGENGEACAVFAGPYTVTMHKSSLLIAGMFSFLNAGSGSNQSNHLYKLGPIHQGIVERGSKTTSDSYILWPAKIGAFSLIMGRHVNHPDTSDLPFSYLIEKNNQTYLVPGVNLRSVGTIRDALKWPKRDKRTDPCKLDYINFNLLSPYTIRKMIAGIEVLHSLRSVSGETSEEYSYQSARIKNSSLEKGIVLYAKAINKFLGNSLIKRLENIRFRTNEEIRSRLKPDTSKGAGEWIDLAGLIVPQKEIENLITAIENGEIDSVEQICSFLEALHRDYYTLEWTWAWDTIQKWYDISPDSITAQDIIRIVNIWKEAVISLDEMLYNDARKEFSLMAQTGFGVDGTNHQKQMDFEQVRGDFESNPFVETVRHHISDKTALGNELIERM | |||||||||||||||||||
1 | 3eh0A | 0.16 | 0.06 | 0.36 | 1.18 | EigenThreader | KSAKNPYLTYARMAQILDTTPQPAQNIAPSA----VIDAKLGNNVSIGAN-------------AVIEGVELGNVIIGAGCFVGKNSKIGAGSRLWANVTIYHEIQIG----------------------------------------------------------------QNCLIQSGTVGADGRVIIGVEIGACTTIDRGTIIGNGVIDNQ----CQIAHNVVIGDNTAVAGVIMAGSLKIGRYCIGGASVINGHMEICDKVTVGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMN-------------------------------------------------------------------------------------------------------------------------------------------------------------------IDDMSKRLKSLERKVNQQD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 3d8vA | 0.14 | 0.07 | 0.52 | 1.32 | HHpred | --LLDADTLADLIAVSAAVT----VLTTTLDDPF------GYGRILRTEVMAIVEQT-DAT-PS-QR--EI--REVNAGVYAFDIA-ALRSALLSSNN---AQQELYLTDAILRSDGQTVHASHVDDSALVAGVN-NRVQLAELASELN------RRVVAHQLAGVTVVDPATTWIDVDVTIGR-----DTVIHPGTQLLGRTQIGG---------RCVVGPDTTLTDVAVGDGASVVR-THGSSSSIGDGAAVGPFTYLRGTALGADGKLGAVEVKNSTIGTGTKVPHLT------YVEYSNIGASSVFVNYD-T--SKRRTTVGSHVRTGSDTMFVAPVTIGDGAYTGAGTVVREDVP--PGALAVSA-GPQRNIENWVQ----------RKRPGSPAAQASKR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 3fsbA | 0.12 | 0.04 | 0.36 | 0.54 | DisCoVER | --------------------------------------------NNISKS---A-------I-IKEGVIIGENVTIEDNVYIDYGCIIRDNVHIKKGSFIGARSILGE-----YLVDFYN---------------------------------------------DRINKKHPLIIGENALIRTENVIYGDTIGDNFQTGHKVTIRENTKIGN---NVKIGTLSDIQHVYIGNYVNIHSNVFVGKSIIKDFVWLFPHVVLTNVTIELFAVIAARSVV-L---------------------PG--------------------------------------IHINEDALVGAGAV-VTKDV-PKETVVVGNPAREICSIRKIKNKITGE----QVY-PRYKGM-PWEETDYDTWI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 7k47A2 | 0.12 | 0.04 | 0.29 | 0.34 | CEthreader | -------------------------RVRDPARLDIRGTVTVGSDVLIDVDVV-----------LEGKVVLGDGVTVGPFNRLKDV-NLGPGTDVRAHCDLEGVVTE-----------------------------------------------------------------GAAQIGPFARLRPGTVLAGVHVGNFVETKKVTLGVGSKANHL----TYLGDAVIGSKVNIGAGTITCSTTTIDNAFIGSNSSLVAPVTIDGATIAAGSVITRNAPDGKLTLARARQETIDGWKRPLK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
5 | 2iuaC2 | 0.13 | 0.04 | 0.33 | 1.13 | EigenThreader | -VDSG------------FPGIHPTAVIHPTA----IIEVCIEPYAVVCQHA------------HVGSACHIGSSVIGAYSTVGEHSYIHPRVVIR-ERVSIGKRVIIQ--------------------------------------------------------------PGAVICGLGKVIIEDDVGANTTIDFKHSVVRESKIDNVQIAH----QVEVGQHSMIVAAGIAGSTKIGNHVIIGGAGITGHICIADHVIMMAQTGVTKSITSPGIYGGAPAIHRQVAKVRNLPRLEERIAALEKLVQKLE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 7k47A | 0.14 | 0.05 | 0.32 | 1.06 | HHpred | ------------------------------------------------------------------------------------WQRRAVRALCAQGARVRDPARLDIRGTVTVGSDVLIDVDV--------------------------------------------VLEGKVVLGDGVTVGPFNRLKDVNLGPGTDVRAHCDLEGVVTEGA----AQIGPFARLRPTVLADGVHVGNFVETKKVTLGVGSKANHLTYLGDAVIGSKVNIGAGTITCNYDG---VNKSTT-----------TIGDNAFISNSSLV-APV---TIGDGATIAAGSVITR--NAPDGKLTLARARQIDGWK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3t57A | 0.14 | 0.05 | 0.39 | 0.28 | MRFsearch | ----------------------------------------------------------------------HPSAVVHPNAVIG------KGVSVGPYCTIG----------------------------------------------------------------------SSVKLGNGCKLYPSHVFGNTELGESCVLM-----TGAVVGDELPGYTFIGCNNIIGFLCIGNNNEIREFCSIHRTVIGDNNLIMGSCHIAHCKIGDRNIFANNTLLA------------------------------------------GHVVVEDNTHTAGASVVHQFCHIGSFAFIGGG--SVVSQDVPKYMMVAGERAELRGL-----NLEGLRRN----------------------GFTMSEMKSLRAAYRKIFMST-----------------------------------------------------------------------------------------------ETVSLSFEERLTELEQDQELYS--------------------VPAVSAMLQSIRDSFTESRRGICK------------------------------------------------------------- | |||||||||||||
8 | 5owvA | 0.10 | 0.08 | 0.87 | 0.76 | FFAS-3D | KSKLDTAECAII--LSVNKDNYERYFLLKEF-QELCKK---------------------IDLRVDIFSMQNAQICI---------LNLFKSGFISKQDLLKALKILEKISKNT----EIFDFILQEKVQSIDQKALFQNDFKELNTINLELQKLDENLKSRLQKTLEKFQNLEAITGV--MNAGKSSLLNALLKEDFLGVETANLT--VLSYGKSEEAKIYQNIALCELKNFSSAKNKISALIKKIEIKSHLELKNNISIVDT-PGLDDYLRESDFLIHLMNASQSLTQKDADFLVHCLLNSRLSK--------------------------------------FLIVLTKADLLSKKDLEEVIVYTKEVDLDENLVEKIDFLCVSAKMASDFYKGLASKESLQKSGMQEFELYAGEKSKIALRAHLELKNILSEYEMQNRLIKENKQGVSEENQKNLVLLLAKKLKERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILR-----EIKFENIKKIEELKTNLSLKYDFLKDDFDNISKNIDSIFQSEKFALLRLKIEKNLKS-DLYELETNLDTVIFDTFKEFKMSEILNSLNINGAFFEFLNDKLKHEKVLQSLKNQDANILNS--FEENLEKIEKLKQLEMGLADKL | |||||||||||||
9 | 4m0mA | 0.16 | 0.12 | 0.75 | 0.72 | SPARKS-K | ----------------------------------------------------------------EQKVKTVTLSFLGTGQHREKVHHILTSFHINPTVARFDGPGSEPKSDPIPGT----YIYNPKDNSKILISPVISQTITNAIQKLTGNLHLLFEAVLYLNDIIEKNGGKLP-----------ETVNLHGFSRGADTCRANLLYQLY--------PDIKVNLFLIDQVPGPGYTVPPNVEHFESTLLHEYRPGFDPQHSGRYVIADPEPYYGEHTGNRVTEDPNTNHTAILLNDDNRFCRETGS-------------------------------------------------LPSVGISPPIIARVGDKKEEVRTHSRFELLCGKENEWGYAKLTKKYHERSQDSVNFKQLYPKSFNWFFEVIVELKSLSESGIDRDEKSSFGQPPVRLSYLQHSLTSIANYYHYHVKNLLLERVKESRTKPDSEAIKHLEQTDE--------------VRQILESLWQQIN--HIPNARQYCEQVKAALREHLEHNQVLQKEEIRKA---DRDNIVQQKYREIRREVIELNAKALESLSQTLNQLSKAH----YG----ETSTDKITQRLDGYKNRNWFWNSVKEVLNFKEQIADKLKERL | |||||||||||||
10 | 5j1iA | 0.11 | 0.03 | 0.30 | 0.69 | CNFpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SELELTLGKLEQVRSLSAI---------------YLEKLKTISLVIRGTQGAEVLRAHEEQLKEAQ-ASLKKLRAQAEAQ-------QPTFDALRDELRGAQEVGERLQQERDVEVERWRERVAQLLERWQAV--LAQTDVRQREL---------EQLGRQLRYYRESADPLGAWLQDARRRQEQIQAM-------DSQAVREQLRQEQAL---LEEIERHGEKVEECQRFAKQYINAI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |