>PF16299 (266 residues) WETFVKVFDNYMAYLRLPKPKLGAVGGFEYLVWNNHVVGYSKSSNLLNLDGITQKVEFVP FDKVMQIFGIPFFKQGETIYLAEMIVWDISKTGEIIEIVFNGENKLEMIEEKGRIKLVSK GTVGWKDKFFNAGEEIVSFDLEPGSKLQKVATSEGLIKLILGRLPAASMEIQILPIERWV EASKEKILLLYAKGDNRIIIRPYSPDFEGADWYVYSLTRNLASKLCEQFNLKLEICPLVC LPLNRVSFLVLVEDEDLLNEVVTQLE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | WETFVKVFDNYMAYLRLPKPKLGAVGGFEYLVWNNHVVGYSKSSNLLNLDGITQKVEFVPFDKVMQIFGIPFFKQGETIYLAEMIVWDISKTGEIIEIVFNGENKLEMIEEKGRIKLVSKGTVGWKDKFFNAGEEIVSFDLEPGSKLQKVATSEGLIKLILGRLPAASMEIQILPIERWVEASKEKILLLYAKGDNRIIIRPYSPDFEGADWYVYSLTRNLASKLCEQFNLKLEICPLVCLPLNRVSFLVLVEDEDLLNEVVTQLE | |||||||||||||||||||
1 | 4hhuA | 0.08 | 0.05 | 0.55 | 0.74 | DisCoVER | ------------------------GV---------------------------------------------------VIVFEGDALEKALKE---IRQARFAGTVTYTL---SGNRLVIVITGVPEQVRKELAKEAERLKAE--FNINVQYQIGSGVVIVFEGDDLALEKALIAAGTVTYTLSGNRLVIVITGVPEQV------------RKELAKEA------------------ERLKAEFNINVQYQITG-SLEHHHH----- | |||||||||||||
2 | 6rc9A | 0.06 | 0.05 | 0.78 | 0.83 | DEthreader | GLPQQEAFGLKVKNAEKRQ-KWNHH-WDWARDVL-LQTTGF---FNPRRQTVAAPIIVPRTMGDAAQGGLRE------DLQLFPWANRPDLPIGW-QVNWSNKLTD--------------SAFVNENAPNSFSTGGLDPTADASFTNKQRQLRLGSIPVLVN-T-LNLPALLNPLVTYFIGFKISATLITPLAWRHNALAFQVS-KPKKVTQSD-KLDDDLKNLLD-PNQ---------------------V--RTKLRQSF---- | |||||||||||||
3 | 1vt4I3 | 0.07 | 0.07 | 0.98 | 0.84 | CEthreader | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
4 | 1vt4I3 | 0.08 | 0.06 | 0.81 | 0.67 | EigenThreader | GG--------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-----------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG----------------GGGGGGGG---GGGGGGGGGGGGGGGGGGG------GG | |||||||||||||
5 | 3p42A | 0.09 | 0.06 | 0.63 | 0.32 | HHpred | -----------------------------------TIYLPGEQ-QTLSVG------PVENVAQLVTQPQLRD-----RLWWPGALLTDSAATGRPVKLDPVDNSNP-PLVGDYTLYTVQRVTITLLGAVSGAGQLPWL----AGRSVTDYLQDHP-----RLAGADKN-NV-VITPEGETVAPVRH--VEP-PPGSQLWLGF-SAHVLPEKYA--DLNDQIVSVLTQRVPEL---------------------------------- | |||||||||||||
6 | 6oycC | 0.15 | 0.12 | 0.80 | 0.57 | MRFsearch | ---------------------------ISYIYWDGTKLQFLG-KSVCFENPLYTWSSQTNYQSKRISPNLPLLRKGTRYSLSLNAELDL-VSSLFVRIEFYNESVGFELLKKDSIIFIYPEAYTYTISLINAGCSDFTFHY---LKLEEVTNLSDVLNLLLVEKK-----DSVYINKIESISQLQQKVELVSNPNIKINVIAYGTQ-----------GNFAALYYAKKFRITAYINDC-----PNVKHYGLVSENSSLNLVSMILS | |||||||||||||
7 | 6vk3B | 0.11 | 0.10 | 0.89 | 0.45 | FFAS-3D | -KTLNQGVKTIFDKLN-ERCIFYQAGFWIYYCPGIEFVQFNTKTGEIVNRDESLVYRLGKPKANVEEREFELLYDDVGYYISEIIICDVTGAERMVEIQYSGPSTIQWVRETKEAQVTIPEL--CNLELLAKNE-----DQKNASPILCRMPAKS---------KIGSNSIDLITKYEPIFLGSGIYFLRPFNTDERMVTDNAMSNWDEITETYYQKFGNAINKMLSLRLVSVWLAEVVDMKDRFQTTLSLNILNS---------- | |||||||||||||
8 | 4a2lA2 | 0.09 | 0.08 | 0.92 | 0.47 | SPARKS-K | GLNLYNPITQRFTSYTLQGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSLVNENVYAILPEGNLWLGTVRFNP--EQRSFTTIKEKDGTTTLFRDSHKRLWIGGEEGLSVFKQEGL---DIQKASILPVSNVTKLEASNGIIWVGTRECFNE-KDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTNRGNPETEKFRNFTESDGLQ-------SNQFNTASYCRTSVGQFGGITTFR-------PELLL- | |||||||||||||
9 | 4a08A | 0.10 | 0.09 | 0.83 | 0.87 | CNFpred | -----------------------EVHNLLIIDQHFEVLHAHQFEYALSLVSCKLGKD-------NTYFIVGTAMVPKQGRIVVFQYSDG-KLQTVAEKEVKG-AVYSMVEFNGKLLASINSTVRLY-EWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLM-----RSVLLLAYKEEIARDPNWMSAVEILDDDNFLGAEN-------AFNLFVCQKHLQEVGLFHLGEFVNVFCVLFGTVGMIGLVTSLSEYNLLLDMQNRLN | |||||||||||||
10 | 2vdcA | 0.09 | 0.07 | 0.79 | 0.83 | DEthreader | PRRVVEKGIEALKAVWGGAGIHQSLSARSIIKHQAQPFRM------LAHGDTVFVRTAPAMVVGGMDRPMRYTITTDLIGGTGM--TNPASGRFVHHDIDQNTQRAIGSPGHQGIKLEVMGDAPTNKNTII----VL-------TAGKLFAGQAGERFARNSGATV--VV---GCEYMT--GG--TAVILGR---VGDNFAAGMT---------------YV-YDLDD-SLPLYINDES------VIFQR---RFAAEIREVTKFW | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |