>PF16292 (302 residues) PLRIRHLAALYGPNIYRPQPGVVLRVGAAADYSDRLRTALKGGALAIGLVIAQLHVEAKP DNDDMLMSAFFTTPEPAIGAELCRYVVDGINAELGHDESWDPDEPLLALRDRRQAQALPV AALQLMANARHRDIPTTILDDGRLLIGQGERGWIVAPADLRAAPDLQPPWSRLGRILIIA VTGERYRQQAIAEQAARHQGIILDQANRASVITALADPACTALIVGFDTDSLIREGLPFD RCDLAIITDRAGSRPPTAADDDEWLRALGLPMLCSVAPTLINLTDPALHPLLSYAPNGVI GW |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PLRIRHLAALYGPNIYRPQPGVVLRVGAAADYSDRLRTALKGGALAIGLVIAQLHVEAKPDNDDMLMSAFFTTPEPAIGAELCRYVVDGINAELGHDESWDPDEPLLALRDRRQAQALPVAALQLMANARHRDIPTTILDDGRLLIGQGERGWIVAPADLRAAPDLQPPWSRLGRILIIAVTGERYRQQAIAEQAARHQGIILDQANRASVITALADPACTALIVGFDTDSLIREGLPFDRCDLAIITDRAGSRPPTAADDDEWLRALGLPMLCSVAPTLINLTDPALHPLLSYAPNGVIGW | |||||||||||||||||||
1 | 2wtzB | 0.12 | 0.09 | 0.75 | 2.62 | HHpred | --------------------------------LAALADQVGAALAEQRAVTEDRTVRAQDV-SPGDLFAALTGSTTHGARH-VGD------AIARGAVAVLTDPAGVA----------------E-IA-GRAAVPVLVHPAPRGVLGGLAATVYGH---------------PSERLTVIGITGTSGKTTTTYLVEAGLAGRRVGPSALTAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGAFTNLSRDHLDFHPSMADYFEA-ASLFDPDSALRTVCIDDDAGRAMAARAA-DAITV | |||||||||||||
2 | 4c12A | 0.09 | 0.07 | 0.74 | 1.03 | SPARKS-K | ------------------------------------------------MDASTLFKKVVLGSLEQQID-DITTDSRTAREGSIFVA-------SVGYTV-------DSHKFCQNVADQG-CKLVVVNKEQSLNVTQVVVPDTLRVASILAHTLY---------------DYPSHQLVTFGVTGTNGKTSIATMIHLIQRKLYLGTNTTPETVSLTKKAGAESMTLEVSSHGLVLGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHAS-LLFSQLGEDVVLNNDDSFSEYLRTVTPYEVFSY | |||||||||||||
3 | 3zl8A | 0.09 | 0.06 | 0.67 | 1.96 | HHsearch | --------------------------------------------------MKDLLTNSKEV-REGDVFVAVK-----------------------G-KRFDGHDF------IDEALRNG-AYAIIAERKTVNSDRIFLVESSVDTLAKLAREKL-----------------GNFSGTVVGVTGSSGKTTTKEILYNLLKRSFKTPGNMNGLPSILNYKGEEILVLEMAAPGDIAHLCKIAPPDVAVLLNVGSAHLEFFGTRERIMETKMEIIKHSKENAITLFDDPDLRKEVPR-YRN-TLF | |||||||||||||
4 | 2wtzB3 | 0.12 | 0.05 | 0.43 | 1.27 | FFAS-3D | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------HPSERLTVIGITGTSGKTTTTYLVEAGLRLTTPEAPTLQAMLAAMVERGVDTVVMEVSSHALALGRVDGTRFAVGAFTNLSHLDFHPSMADYFEAASLFDPDALRARTAVVCIDDDAGRAMAARAADAI--- | |||||||||||||
5 | 3lk7A | 0.14 | 0.10 | 0.72 | 2.38 | HHpred | -------------TTFENKKVLVLGLAR-SG--EAAARL-----------LA----------KLG-AIVTVNDGKPNPTA-------QSLLEGIKGS---HPLELLDEDFCYIKNPGIP-YNNPV-KKALEKQIPVLTEVE---LAYL------------------------VSESQLIGITGSNGKTTTTT-IAEVLNGQGLLAGNIGPASEVVQANDKDTL-VELSSFQL---GVKEFRPHIAVITNL-PTHLDYHGSFEDYVAAKWNIQ-NQSSSDFLNFNQGISKELAKTTKATIVPF | |||||||||||||
6 | 4qdiA | 0.12 | 0.09 | 0.72 | 1.00 | SPARKS-K | ---------------------------------------VPLEPWTAQQLQQATQGYWHIPQTERILDAFLA---------------------LKGERF-------DAHNFVAQVVANG-CQVAIVERPIDAEIAQLVVADTRLALGQLGAYRREQN----------------AQLKVIALTGSSGKTTTKEMLGSILSRTLITRGNLNGVPMMLLRKEHQYAVMELGANGEIDYTSKIVQPHVAGILNIGTAHLGEFGGRDGICRAKSEIYRHILPQGIVPQQDDFTAEIREAAKHQIMSF | |||||||||||||
7 | 4c12A | 0.10 | 0.08 | 0.74 | 1.96 | HHsearch | -MD-----------------------------ASTLFKKVKVKRVLLEQQIDDITTDSRTA-REGSIFVASV-----------------------G-YTVDSHKFCQ------NVADQG-CKLVVVNKEQPANVTQVVVPDTLRVASILAHTLYD-----------Y----PSHQLVTFGVTGTNGKTSIATMIHLIQRQKSAYLGTNGSLTKEAVDAGAESMTLEVSSHGLVLGRLRGVEFDVAIFSNLTQDHLDFHGTMEAYGHAS-LLFSQLGEEKYLNNDDSFSEYLRTVTPYEVFSY | |||||||||||||
8 | 2jfgA3 | 0.13 | 0.05 | 0.41 | 1.09 | FFAS-3D | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------REAQAPIVAITGSNGKSTVTTLVGEMAKVNVGVGGNIGLPALMLLDDECELYVLELSSFQLET--TSSLQAVAATILNVTEDHMYPFGLQQYRAALRIY---ENAKVCVVNADDALTMPIRGADERCV--- | |||||||||||||
9 | 3lk7A3 | 0.13 | 0.06 | 0.42 | 1.94 | HHpred | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------ELAYL-VSESQLIGITGSNGKTTTTT-IAENAGGQRGLAGNIGASEVVQAANDKD-TLVELSSFQL---GVKEFRPHIAVITNL-PTHLDYHGSFEDYVAAKWNI-QNQSSSDFLNFNQGISKELAKTTKATIVPF | |||||||||||||
10 | 4qdiA | 0.13 | 0.10 | 0.76 | 1.96 | HHsearch | ------------------VPLEPWTA-------QQLQQATQGYWHKDQTEIKRILTDSRHA-ESGDAFLALKG------------------------ERFDAHNF------VAQVVANG-CQVAIVERPIDAEIAQLVVADTRLALGQLGAYRRE----------------QNAQLKVIALTGSSGKTTTKEMLGSILSAPLITRGNLNGVPMLLERKEHQYAVMELGHQGEIDYTSKIVQPHVAGILNIGTAHLGEFGGRDGICRAKSEIYRHILPQGVVPQQDDFTAEIREAASHQIMSF | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |