>PF16283 (366 residues) YTGINKIYLSAETPVITESENIPLTVNVDLTLTCEQDLVLNFELPDDKNGVLRLENNPVT IKAGKRSATFEVVSNQKNLLTEDTYFQVGISQFPTDNLMLNETLQVRVKPNPKIPELSPQ QKALIKGYKTKYGIDLNKWLGVLSCHTTVQSPADGYLQPFAAAFTKEYDGKTVITLSEQA TEDMPVLKMTDNPFGLTEYLYFVLRSETVADPEFWTQQPEPQKLMKLLNWNKESKETFAV SLDAIRLKDITSTSTRLEYLGPGKNYYGAPITIVPFTYQFSALDRQNKLLESGNAEIKEI NDQGASADPAYYLNCYDLVNSDNYDTPENFIKSTGNIDFATDKMTYQFLLSHANAGGYTR ITVVYE |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | YTGINKIYLSAETPVITESENIPLTVNVDLTLTCEQDLVLNFELPDDKNGVLRLENNPVTIKAGKRSATFEVVSNQKNLLTEDTYFQVGISQFPTDNLMLNETLQVRVKPNPKIPELSPQQKALIKGYKTKYGIDLNKWLGVLSCHTTVQSPADGYLQPFAAAFTKEYDGKTVITLSEQATEDMPVLKMTDNPFGLTEYLYFVLRSETVADPEFWTQQPEPQKLMKLLNWNKESKETFAVSLDAIRLKDITSTSTRLEYLGPGKNYYGAPITIVPFTYQFSALDRQNKLLESGNAEIKEINDQGASADPAYYLNCYDLVNSDNYDTPENFIKSTGNIDFATDKMTYQFLLSHANAGGYTRITVVYE | |||||||||||||||||||
1 | 3us9A | 0.09 | 0.05 | 0.58 | 0.78 | DisCoVER | SKIFFEQGTYQ--CLEN---CGTVALTIIRRGGDTNTVFVDFRTEDANASDYEFTEGTVVFKPGETQKEIRVGIIDDIFEE-DKNFLVHLSNVKLACLGSPSTATVTIFDDD-------------------------------------------------------------------------HAGIFTFE-----E--PV-THVSE------------------S-IGIMEVKVLRTSGA-R------GNVIVPYKTIEGTARGGGEDFDTNDEIVKTI-------------------------S-VKVID----DEEY-EKNKTFFLEIGEPRLVRPILGEHTKLEVIIEESY--------- | |||||||||||||
2 | 6pcvA | 0.08 | 0.05 | 0.68 | 0.67 | DEthreader | DFKLV-AKRLLIL----GSLEVAGSINEDL-------SEVELVATKAKEII---------------------AGLCAGQHTNVHLEHGVVYEY--VRCHVL-EKIVEPRGFGLAILFA---R-----AP-EPHPLCGLDFCP--CHINLMEV------------QHCIT----AAPSW-K----AIQAAAVCTFSEQLA---YNN--NG----EYE--ES-RDASRKWL-----TGVLLHCQSLMLEDWVTLSELALFTKVL-------------NSLKVYYRKLRAFYLERSNLVKIDQL-IRPINALDELCRLMSFVH-GSVGA--IP------------CQMVMSTVSLMQDIRKPRVI---- | |||||||||||||
3 | 3rb5A | 0.08 | 0.05 | 0.64 | 0.66 | CEthreader | ----IRMYFEPGHYTVMENCG-EFEVRVVRRGDISTYASVEYETQDSAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDVFEEDECFYIRLFNPSEGKLAVPMIATVMILDDDHAGIFAFTDSVFEITESVGRFELKVMRYSGARGTVIVPYWTENDKDYEGARGELVFENNESEKFIDLFDVSFKVHIGEPRLAPDDELAAKIKEVEKKPVQDLTELDRILLLSKPRNGELTTAYVRIR------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 3f85A | 0.07 | 0.05 | 0.71 | 0.75 | EigenThreader | --MIDLLQAKL--AYSP---ASKTFEMTQVHTNDATKKVIVKLADTPNSTVQMPILSAKEFESSSQELVISAAPKTAGTAPTAGSGVVSLVMSDNKQVEKNITVTASVDPV---------------------------------IDLLQADGNALPSAVKLASKQVHTNKKVIVKLADT-----PVSWGGQSTTAAAALG---------------------------YSASGVNGVSSSQELVISAAPKTAGTAPGNYSGVVSS-----DNKASVDPKLAYS---------------------PASKTF------EVHTNDATK---KVIADTPQLTDVLNSTGVVSLVMTLGSDNKQVEKNITVT | |||||||||||||
5 | 4dqaA | 0.11 | 0.09 | 0.80 | 0.43 | HHpred | ----PKVYFESEYNFSVEDEDVTFDLVSRLSSATSSQVDVSYSVAEPDVSQVKLSSTTSSISSGKLYADIEVELSGLEALKAGNSYVLRVHSSSVSTLSGTNIAYFFFSKPLKITK--AGNFS--NHYISVKFPVGT-FFSSFTYEALINVDYFLD------NNTIGTEGV-ILRIGDAGGGPKDYLEVAGGQ----NY----RVTKPLLTNR-WYH--------VALTYD-QPTGKTGIYVNGEKWAGSDWGIDGFD-------PNSD-GFYIGRIYGFK-WGRPF----HGKSEENQLKQN-LGVDPA-----SE-GLALY------YKLDGSETQ-EGGV-----IKDAT--GRING------ | |||||||||||||
6 | 3us9A | 0.14 | 0.07 | 0.52 | 0.53 | MRFsearch | -----KIFFEQGTYQCLEN-CGTVALTIIRRGGLTNTVFVDFRTEDNAGSDYEFTEGTVVFKPGETQKEIRVGIIDDDIFEEDKNFLVHLSNV---------------------------------------------------------------KVSSEALACLGSPSTATVTIFDD-----------------------------------------------------DHAGIFTFEEPVTHVSE---SIGIMEVKVLR-----RGNVIVPYKTI---------------------------------------------GGGEDFEDTCGELEFQNDEIVKTISVKVIEYEKNKTFFLEIG | |||||||||||||
7 | 3eadB | 0.11 | 0.03 | 0.29 | 0.66 | FFAS-3D | -----RMYFEPGHYTVMENCGE-FEVRVVRRGDISTYASVEYETQDGTGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDVFEEDECFYIRLFNPSEGVKLAVPMATVMILDDDH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 4r04A | 0.14 | 0.12 | 0.89 | 0.71 | SPARKS-K | AGGTYSLLLSSYPTNINLSKDDLWIFNIDEVREISENGTIKKGKLIKDKNKLIIGNQTIDFSNKDRYIFLTCELDDK------ISLIIEINLVA-------KSYSLLLSGDK--NYLISNLSNTIEKINTLGDSKNNKYFGAISKKSIIHYKKDSKNILEDSTLEFNSKDINVFMKDDINNTDKSSISLVSNGLYLNESVYSSYLDFVKNSDGHHNTSNFMNLFLDNISFGFENLGYVEFICDNGEWKTSGNGRNVVVEPIYNPDTGEDISTSLDFSYEPYGIDRYI----------------------NKVLIAPDLYTSLNYYSNEYY--PEIIVLNPNKKVNINLDSSSFEEGSDFILVRYLE | |||||||||||||
9 | 1vpkA | 0.11 | 0.08 | 0.73 | 1.26 | CNFpred | ---LAGFLFEVKNFYICATD-LETGVKATVNAEISGEARFVVPGDVIQKMVKVLPDEITELSLE--GDALVISSG-------STVFRITTMPAFPEITPAESGITFEVDT--------SLLEEMVEKVIFAAAKD-MRNLNGVFWELHKNL-----------LRLVASDGFRLALAEEQIEEEASFLLSL----KSMKEVQNVLDNTT--------------------------EPTITVRYDGRRVSLST---NDVETVMRVVDAEFPD-ETFKTKVVVS-RKELRESLKRVMVIASKG-------------------------------SESVKFEIEENVMRLVSKSPD-YGEVVDEVEVQKE | |||||||||||||
10 | 2pn5A | 0.05 | 0.03 | 0.61 | 0.67 | DEthreader | TVQPFYIVENL-PYSIKRGE-AVVLQFTLF-NNLGAEYIADVTLYNVANQTEFSYTKSVSVPPKVGVPISFLIK-A--RK-LGEMAVRVKASIMLG-HETDALEKVIRVMPESLVKKAD-------------------------GVPTGCGRYRQGSFG--WET--------------------------------------LTAFVGTSMQLVMALLEIATYTAYLLVQRYTGSFPSFENRFQLDLEKQNTLRLKVCASYIPQ----LT-DRRSNMA-----------------------------------Q--------------YDNMGNCFTLTAYAYVVVYDY---------------VY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |