>PF16264 (211 residues) YIAVIGDFIDSKQVEQRYQFQEKFKKALEKINQKYQKDIVSKFSITLGDEFQGLLKIEAN VFQMIDDISLAMKPHSIRYGIGIGQIITEINPEMSIGADGPAYWQAREAITYIHQKNDYG QTKIAIRTKDLETDVVINALISAGDAIKSNWRASQEEVFETILHLSYYQENFDQKEVSEK LGLTASSLSKRLKSSSVKVYFRTRNAAKELL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | YIAVIGDFIDSKQVEQRYQFQEKFKKALEKINQKYQKDIVSKFSITLGDEFQGLLKIEANVFQMIDDISLAMKPHSIRYGIGIGQIITEINPEMSIGADGPAYWQAREAITYIHQKNDYGQTKIAIRTKDLETDVVINALISAGDAIKSNWRASQEEVFETILHLSYYQENFDQKEVSEKLGLTASSLSKRLKSSSVKVYFRTRNAAKELL | |||||||||||||||||||
1 | 5tw1F | 0.10 | 0.08 | 0.79 | 1.52 | HHpred | -----------------QWICRDGDRAKNHLLEANLRLVVSLAK--------RYTGRGMAFLDLIQEG--NLGLIRAVEKFD---------YTKGYKFSTYATWWIRAITRAMADQARTIRIPISIEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFQP------RTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVL--- | |||||||||||||
2 | 6in7B | 0.09 | 0.07 | 0.79 | 1.03 | SPARKS-K | --------------EQDQQLVERVKRAFDLLVLKYQHKILGLIVRFVH--------DAQEAQDVAQEAFIKAYRALGNF-------------RGDSAFYTWLYRIAINTAKNHLVARGRRGDHALKDIESPERAMLRDEIEATVHQTIQQLPEDLRTALTLREF-----EGLSYEDIATVMQCPVGTVRSRIFRAREAIDKALQPLL---- | |||||||||||||
3 | 6yiiA | 0.08 | 0.08 | 0.97 | 1.11 | MAPalign | GVHMYADIMNLECHKRTLRFLDQHYRAVKRILNKV----DARRVDFHSQRLHSLFERVQRAVATAQLIIDTGPAAKVRIGIDTLAVNNGRSGYREPLFLGDPANHAAKLANNARKAIGLAEFTAYVADHINEKTDDVVRTLHVIRSELERVVTSD--FEGRRVRFIGDCVQALSC-DGTAHTTDSVSEATRLAGALRSSFNLAIERLNIET | |||||||||||||
4 | 6in7B | 0.08 | 0.06 | 0.79 | 1.40 | HHsearch | -------------EQDQQLVQRGDKRAFDLLVLKYQHKILG--------LIVRFVHDAQEAQDVAQEA--FIKAYRALGNFR-----------GDSAFYTWLYRIAITAKNHLVARGRRPFEGDHKDIESPERAMLRDEIEATVHQTIQQLPEDLRTALTLREEG------LSYEDIATVMQCPVGTVRSRIFRAREAIDKALQPLL---- | |||||||||||||
5 | 6in7B | 0.10 | 0.08 | 0.78 | 1.10 | FFAS-3D | --------------EQDQQLVERVKRAFDLLVLKYQHKILG--------LIVRFVHDAQEAQDVAQEAFIKAYRA---------------LGNFRGDSAFYTWLYINTAKNHLVARGRRPFEGDHADIESPERAMLRDEIEATVHQTIQQLPEDLRTALTLR-----EFEGLSYEDIATVMQCPVGTVRSRIFRAR----EAIDKALQPLL | |||||||||||||
6 | 5zx2F | 0.10 | 0.07 | 0.74 | 1.40 | HHsearch | --------------------DEELTARFERDAIPLLDQLYG--------GALRMTRNPADAEDLLQET--MVKAYAGFRSFR-----------HGTNLKAWLYRILTTYINSYRKKQRQPAEYPTIHLRSAEVEALEALPDTEIKEALQALPEEFRMAVYYADEG------FPYKEIAEIMDTPIGTVMSRLHRGRRQLRGLLA------- | |||||||||||||
7 | 3pjzA | 0.09 | 0.07 | 0.77 | 0.83 | DEthreader | -ILLLFTMAPALVLGVFVTTFFVLLFCGAMCWF---R-HKH--------------DGFLIVVLFWTVLGSAGSSYRFLFGMIV------------A----ALWYIYLLTFTIAITLVSAGSGGMKIRLAVVDAWGFFSAYALVFVVCMLGLIATGMDELSASAAPGLVALHFGD--V----------ND-KAKWVLIVSMLFGLEIFTLLI | |||||||||||||
8 | 4a0fA | 0.06 | 0.05 | 0.86 | 0.83 | DEthreader | ASFLLLYLKPIQTGFPSDSDSRFVFSKLDSLSLRRQ-IPIAPELLCKILLLCL----PFR-LPGILIAAVVFED-L--VDDLIEWFVE--------SDGVF-KALKET-VLANLERL-ERLNGKLAGEVFW-WP--W-DNGSTAIEIALKAFRFKVIALI-IEPVIHVDPLFQRVLVNECRNRKI-PVIFKPDIACFALAVTHYSAHG--- | |||||||||||||
9 | 1y11A | 0.11 | 0.06 | 0.57 | 0.63 | HHpred | VTVAFADLVGFTQLGEAEELGHLAGRLAGLARDLTA--PPVWFIKTIGDAVMLVCPDPAPLLDTVLKLVEVVNFPRLRAGVASGMAVSRA-----GDWFGSPVNVASRVTGVARPG--A----VLVA--DSVRE-AL-------------------------------------------------------------------------- | |||||||||||||
10 | 3onqA | 0.09 | 0.08 | 0.85 | 0.83 | DisCoVER | FNCFAIGGV-P--S-----ALASTSLAIRKA---VRDLGGEHVVIGTFLLALACQGAV-TPEVTCTAV-PAFSEEPLYLSPVRSGVAG---------ASHALR-ETF-SLQAAPALSTPSRPLRAPERALLGDDYAREELYNVYQVLRENPDDPTYLTVSTFLKYG-----SSLENTAKELNVHPNTVRYRLKRAAETTAYVL-TTALAI- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |