>PF16261 (319 residues) RQFISWLSEQRISLAFTTYQTGKLFLIGVASDRRLSVFERTFERCMGLWASPDRLYTSSL YQVWRFENALESGQLYNGGYDRLYVPQVGYTTGDIDIHDIHVDSQGRVIFVNTLFSCLAT ISDRYSFIPLWQPSFISRLAAEDRCHLNGLAMENGQPRYVTAVSQSDVSDGWRDRRRNGG CVIDVPSNEIVVSGLSMPHSPRVYRDRVWVLNSGTGYFGTVDINAGKFNPIAFCPGYLRG LALWGDYAVVGLSKMRGNKTFSGLPLDENLAAKDVEPRCGLQVIDLRSGDIVHWLRIEGM VEELYDVAVIPGVRQPMAL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | RQFISWLSEQRISLAFTTYQTGKLFLIGVASDRRLSVFERTFERCMGLWASPDRLYTSSLYQVWRFENALESGQLYNGGYDRLYVPQVGYTTGDIDIHDIHVDSQGRVIFVNTLFSCLATISDRYSFIPLWQPSFISRLAAEDRCHLNGLAMENGQPRYVTAVSQSDVSDGWRDRRRNGGCVIDVPSNEIVVSGLSMPHSPRVYRDRVWVLNSGTGYFGTVDINAGKFNPIAFCPGYLRGLALWGDYAVVGLSKMRGNKTFSGLPLDENLAAKDVEPRCGLQVIDLRSGDIVHWLRIEGMVEELYDVAVIPGVRQPMAL | |||||||||||||||||||
1 | 3fcsA1 | 0.10 | 0.09 | 0.88 | 1.33 | DEthreader | QLTFY-F--GRVAIVVGAPRTGGVFLCPWRAEGGQCPSLLFLQGGASVVSWSDVIVACAPGSCFLAQPES-----GR--RAEYSPCRGNTDKRYCEAFSSVVTQAGELVLGAPGGGLLAQAPVADIVSQSLSFD-SSNPEYFDGYWGYSVAVGETTEYVVGAPTWS--------WTL-GAVEILDSYQRLHRLRGSYGHSVAVTDHDLLVGAPLYGRVYLFLQPALGPSLLLTGQGRGSAIAPLDNDIAVAAPYG---------------G-P-SGR-GQVLVFLGLRSRPQVLDSPFPGSAFGFSLRGAVDYPDLIVA | |||||||||||||
2 | 6gc1A | 0.12 | 0.09 | 0.79 | 2.17 | HHpred | ------VDQVTDRLVIADTGHHRILVVWKN--GQIQYSISTFNSPQGVAIMNNIIYVADNHLIRKIDLEAEKVSTVAGIGIQGTDKEKGEQQPISSPWDVVFG--DILWIAMAGTHQIWALLLDGTCLRFAGSENRNYPHKAGFAQPSGLSLASSC-LFVADSESS------------TVRTVSLKDGAVLVGKLQHPLGVTWDKNLLYVADSYNHKIKVVDPKTKNCTTLAGTGNEPGGLCIGEELLYVADTNN-----------------------HQIKVMDLETKMV-SVLPIF--------------------- | |||||||||||||
3 | 1npeA | 0.11 | 0.08 | 0.77 | 0.68 | DisCoVER | ----------GTHLLFAQT--GKIERLPLNTMKKAKAFLHIAKVIIGLAFDCKVVYWTDIPSIGRASLHGGEPTTI--------IR--QDL---GSPEGIALDHLRTIFWTDSQLDRIEVAKMDGTQRRVL-F-DT------GLVNPRGIVTDPVGNLYWTDWN-RDN---------PKIETSHM-DGRRILAQLGLPNGLTFDASQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWK-T----------------------NSVIAMDLAISKEMDTFHPHKQT-RLYGITIALSQ------ | |||||||||||||
4 | 3vgzA | 0.13 | 0.11 | 0.82 | 0.35 | MRFsearch | --AYEAYSQQENALWLATSQGGVVYRLDPVTLEVTQAIHND-LKPFGATINNQTLWFGNTSAVTAIDAKTGEVKGRLVL----DDRKRTEEVRPLQPRELVADDATNTVYISGIESVIWVVDGGIKLKTAIQN----------TGKSTGLALDSGKRLYTTNA-------------DGELITIDTADNKILSRKEHFFINISLDTQRAFITDSKAAEVLVVDTRNGNILAKVAA-PESLAVLFNPNEAYVTHRQ-----------------------AGKVSVIDAKSYKVVKTFDTP---THPNSLALSADGKTLYVS | |||||||||||||
5 | 1npeA | 0.11 | 0.08 | 0.77 | 1.40 | SPARKS-K | ------------GTHLLFAQTGKIERLPLERNTEAKAFLHIAKVIIGLAFDCKVVYWTDIPSIGRASLHGGEPTTIIRQ-------------DLGSPEGIALDLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD--------TGLVNPRGIVTDPRGNLYWTDWN----------RDNPKIETSHMDGTNRAQDNLGLPNGLTFDSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTN-----------------------SVIAMDLAISKEMDTFHPHKQ-TRLYGITIALSQC----- | |||||||||||||
6 | 1fwxA1 | 0.09 | 0.08 | 0.82 | 0.37 | MAPalign | --HVHMSFYDGRFLFMNDKANTRVARVRC-DVMKCDAILEIAKGIHGLRPQKNYVFCNGENVFTAVDADKWEVAWQ--------------VLVSGNLDNCDADYEGWAFSTSYNSDHIVVFNIAEISLFTRY--------IPIANNPHGCNMADKKHLCVAGKLS------------PTVTVLDVTRFAVVAELGLGPLHTAFDGGNAYTSLFLDSQVVKWNIEAYPIKDKLDVHYQPGHLKTVMDWLVCLSKFSK-----------DRFLNVGPLKPENDQLIDISKMVLVHDGPTFAEP---HDAIAVH-------- | |||||||||||||
7 | 3vgzA | 0.11 | 0.10 | 0.86 | 0.34 | CEthreader | KGAYEAYSQQENALWLATDKGGVVYRLDPVT-LEVTQAIHNDLKPFGATINNQTLWFGNTVAVTAIDAKTGEVKGRLV----LDDRKRTEEVRPLQPRELVADDATTVYISGIGESVIWVVDGGNIKLKTAI---------QNTGKSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKL-----LDDGKEHFFINISLDTQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-SLAVLFNRNEAYVTHRQA-----------------------GKVSVIDAKSYKVVKTFDTPTH---PNSLALSADGKTLYVS | |||||||||||||
8 | 3v64C | 0.10 | 0.08 | 0.81 | 0.96 | MUSTER | DRRSCKALGPEPVLLFAN--RIDIRQVLPHR-SEYTLLLNNLENAIALDFHHELVFWSDLDRILRANLNGSNVEEVV-------------STGLESPGGLAVDWHDKLYWTDSGTSRIEVANLDGAHRKVLL--------WQSLEKPRAIALHMEGTIYWTDWGN-----------TPRIEASSMDGSIIADTHLFWPNGLTIDGRRMYWVDAKHHVIERANLDGSHRKAVISQGPHPFAITVFEDSLYWTDWHT-----------------------KSINSANKFTGKNQEIIR--NKLHFPMDIHTLHPQRQPAGK | |||||||||||||
9 | 6gc1A | 0.12 | 0.10 | 0.81 | 0.66 | HHsearch | LLFPGKVTVDVTRLVIADTGHHRILVVWKN--GQIQYSIGTFNSPQGVAIMNNIIYVADNHLIRKIDLEAEKVSTVAGIGIQGTDKEKGEQQPISSPWDVVFG--DILWIAMAGTHQIWALLLDGTCLRFAGSGNEEYPHKAGFAQPSGLSLASWSCLFVADSESS------------TVRTVSLKDGAVVNAKLQHPLGVTWDKNLLYVADSYNHKIKVVDPKTKNCTTLAGTFNEPGGLCIGEELLYVADTNN-----------------------HQIKVMDLETKM-VSVLPIF--------------------- | |||||||||||||
10 | 1npeA | 0.11 | 0.09 | 0.78 | 1.55 | FFAS-3D | ----------GTHLLFAQ--TGKIERLPLERNTAKAFLHIPAKVIIGLAFDDKVVYWTDEPSIGRASLHGGEPTTIIR-------------QDLGSPEGIALDHLGRIFWTDSQLDRIEVAKMDGTQRRV--------LFDTGLVNPRGIVTDPRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDN-------LGLPNGLTFDSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTN-----------------------SVIAMDLAISKEMDTF-HPHKQTRLYGITIALS------- | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |