Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IIFYKNRFWWISEKGFLLHTASIDDIVKQAFITDVNVNSLIVDANDVNIIQRIEDVLKNPYIAEIKLSNKSAILLKGVVLYFNEWDDLIRHSSKLEKLLKTMEPRTEYFLSSSGLVYKIR |
1 | 2vh1A2 | 0.08 | 0.07 | 0.93 | 1.00 | DEthreader | | ARWNDQHMVDA----EGNTFSVPTSKQVLPML-YGP-EGSAN-E-VLQGYREMGQMLARFTLKEAAMTSWQLTLNNDIKLNLGR-GDTMKRLARFVELYPVQQQRISYVDLYDGAAVGWA |
2 | 2vh1A2 | 0.10 | 0.10 | 0.97 | 1.05 | HHpred | | -IARWNDQHMVDAEGNTFSVPPERTKQVLPMLYGPEGSANEVLQGYREMGQML-A-KDRFTLKEAAMTARQLTLNNDIKLNLGRG-DTMKRLARFVELYPVLQKRISYVDLRYDGAAGWA |
3 | 1yr1A | 0.13 | 0.10 | 0.79 | 1.13 | DisCoVER | | AYVYDQTFFPLLENGRLLKQEGT--KT-APSDAPVLV-GWKDGDAIAEMTGQLAELPAAVLGAMSEIHYVIVYMNDGYEVSATIR--QF--ADKLSPAIAAAL----------------- |
4 | 2vh1A | 0.12 | 0.12 | 0.97 | 1.27 | MRFsearch | | -IARWNDQHMVDAEGNTFSVPERTSKQVLPMLYGPEGSANEVLQGYREMGQMLAKD--RFTLKEAAMTSWQLTLNNDIKLNLG-RGDTMKRLARFVELYPVLQKRISYVDLRSGAAVGWA |
5 | 2vh1A2 | 0.08 | 0.07 | 0.93 | 1.09 | SPARKS-K | | IARWNDQH-MVDAEGNTFSVPPERSKQVLPMLYGPSA------NEVLQGYREMGQMLDRFTLKEAAMTARQLTLNNDIKLNLGR-GDTMKRLARFVELYPVLQQQISYVDLRYDSGAAVG |
6 | 2vh1A2 | 0.10 | 0.09 | 0.96 | 1.11 | CEthreader | | PIARWNDQHMVDAEGNTFSVPPERTSQVLPMLYGPE----GSANEVLQGYREMGQMLDRFTLKEAAMTSWQLTLNNDIKLNLGR-GDTMKRLARFVELYPVLGKRISYVDLRYDSGAAVG |
7 | 2vh1A | 0.10 | 0.10 | 0.97 | 1.90 | HHsearch | | PIARWNDQHMVDAEGNTFSVPPETSKQVLPMLYGPEGSANEVLQGYREMGQMLA--KDRFTLKEAAMTARQLTLNNDIKLNLGRGD-TMKRLARFVELYPVLQKRISYVDLRYDSGAAVG |
8 | 2vh1A | 0.09 | 0.08 | 0.93 | 1.00 | DEthreader | | ARWNDQHMVDA----EGNTFSVPTSKQVLPML-YGP-EGSAN-E-VLQGYREMGQMLARFTLKEAAMTSWQLTLNNDIKLNLGR-GDTMKRLARFVELYPVQQQRISYVDLYSGAAVGWA |
9 | 1yr1A | 0.10 | 0.08 | 0.86 | 1.18 | HHpred | | YVYDRQTFFPLLENGRLLKQGTKTAPSDAPVLVGWKDGDA--IAEMTGQLAEL-PAAVLGAMSEIHYKPEIVYMNDGYEVS-ATIRQFADKLSHYPAIAAALDRNVK------------- |
10 | 2vh1A2 | 0.12 | 0.12 | 0.97 | 1.22 | MRFsearch | | -IARWNDQHMVDAEGNTFSVPERTSKQVLPMLYGPEGSANEVLQGYREMGQMLAKD--RFTLKEAAMTSWQLTLNNDIKLNLG-RGDTMKRLARFVELYPVLQKRISYVDLRSGAAVGWA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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