Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | IYSFVDSSKKGNERLSDKTTQQEKKKDDKDKKEKKDKKSVEEKKNNTQQTQQVPQTQQTQQTQQTVQTPQRPTTQTPVRQNPQTGEKRAKEPKTDERKKTRQDSSNSKESPNEKDQSSTQQKPQQNKSNQSSENRQSTQNKSNQTQSTRPQNNGNSGNQNASSGQNTQKQNN |
1 | 4gkwA | 0.11 | 0.10 | 0.90 | 1.24 | SPARKS-K | | KEDEVADLKQDTESLQKQLEENQEELEIVGNMLREEQGKVDQLQKRNVAHQEIGKLRAELGTAQRNLEKADQLLKRNSQQQNQQSLDMRKLGELEADLKEKDSMVESLTETIGILRKELENEKLKAAENMDSFEKLSMENENLKEKIAHYRAQRF----------------- |
2 | 2dfsA | 0.09 | 0.06 | 0.66 | 1.18 | CNFpred | | --------------------------------------------------------SDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKKLVEETKQLELDLNDERLRYQ-- |
3 | 1u6fA | 0.04 | 0.02 | 0.44 | 0.84 | DisCoVER | | DVLRNLMV---N---Y------------------------------I--PTTVDE-LRFEYGPIESVKIVCDRETRQSRGYGFVKFQ------------------------------------------------SGSSAQAIAGLNGFN-KRLKVALAASGH--------- |
4 | 2q6hA | 0.01 | 0.01 | 0.83 | 0.83 | DEthreader | | H--ILAMAGNAVGLGNFLRFPVQAAENGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGH--VRKDQD--------IVLSGTAATLEKEVI---------IPAA-----VA-FGVANVAIAKAGAFNLG--LFFAGLTSIAIMQPMITAVSMDAGTI-VVFFGLTLVLLVV |
5 | 1zcjA | 0.06 | 0.06 | 1.00 | 0.51 | CEthreader | | HFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYRE |
6 | 2ch7A | 0.06 | 0.06 | 1.00 | 0.62 | EigenThreader | | SHMKDVQTETFSVAESIEEISKANEEITNQLLGISKEMDNISTRIESISASVQETTAGSEEISSATKNIADSAQQAASFADQSTQLAKEAGDALKKVIEVTRMISNSAKDVERVVESFQKGAEEITSFVETINAIAEQTNLLALNAAIEAARAAGRGFAVVADEIRKLAEES |
7 | 3ke3A1 | 0.11 | 0.01 | 0.10 | 0.24 | HHpred | | CAGLV-LSAAAIKKVESTE--------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6yvuA | 0.12 | 0.05 | 0.38 | 0.65 | MRFsearch | | --GLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQ--------------------------------------------------------------------------------------------------------- |
9 | 6obiA | 0.12 | 0.03 | 0.29 | 0.50 | FFAS-3D | | --------RRIQEEMEKERKRREEDEQRRRKEEEERRMKLEMEAKRKQEEEERKKRED------------------------------------------------------------------------------------------------------------------ |
10 | 5dfzB | 0.09 | 0.09 | 1.00 | 1.23 | SPARKS-K | | NLLCSWSVRASKSLFWKKIITNHVDSFGNNRIEFIVYSHDNKEIPLTAEDRNWIDKFHIIGLTEKDIWKARVMAANPNLKNVFVQLEPTSYHMHSPNHGLKDNANVKPERKVVVSNSYEGDVESIETFKILPPLRDYKEFGPIQEIVRSPNMGNLRGKLIATLMENEPNSIT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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