Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | PRFSIFRNKRMKGWWPFVKLKDQEDEEREEREAKEKKKKKKKRRSVKPEDVEFTDPSGNKFILTGKVEAEFQLLTVEEAEKSPVGLGRKEPEPLEKPNRPKTSFNWFVNPMKTFIFFIWKRYKKYIIALLILAVITIFLVLLLYTMPGYISQKI |
1 | 2zt9B | 0.08 | 0.03 | 0.31 | 0.62 | DisCoVER | | -LEILPEWYLYPVFQILRS-------------------------------------LPNKLLGVLAMTLWLGI-----------------GAAL----PLDKSLTLG----------------------------------------------- |
2 | 4m48A | 0.08 | 0.06 | 0.80 | 0.83 | DEthreader | | ----------GFAVDLNVPYYK----FESQFQSASEYFNRYILMACL------RGLSGIYL-------SLGPGL--VYKDALLTSFINATSATL-LDFGSEAIITV-LFLYFVVGLASCTQGGFYFFHLLDRYAGYSILVAVFFEAIAVSWIYG |
3 | 4wz9A1 | 0.09 | 0.09 | 1.00 | 0.49 | CEthreader | | RTFTGTVGIQLQVVQATDKLVMHNRGLVMSSAKVSSLPNGVTGAPTLIGDVQYSTDEHITFTSPTILQPGTYLLEVAFQGRLATNDDGFYVSSYVADNGERRYLATTQFESTSARMAFPCYDEPGLKATFTVSITHSLSYKAISNMPQKTTTDI |
4 | 5zkxA | 0.05 | 0.05 | 0.93 | 0.82 | EigenThreader | | NVSRLQINFIIGYRAYWRSYCYNGELKTWGQEESSICFVDWKMDAKELEKRSNNNHFAHHTCNLSWRCGVTNTHNE------KQKNNLLHPGNISEKLHAASVYDVNNVIHSLVYETESLRLSLAQLDHRFVSSLAKIDDRLIGALLE-----K |
5 | 3ixzA | 0.17 | 0.11 | 0.65 | 0.31 | HHpred | | ----------------------------------LENMKKEMEINDHQLSVAELEQKYQTSATKG--------LSASLAAELLLRDG---PNALRPPRGPEYVKFQLAGGLQCLMWVAA------AICLIAFAALALIAVVVVTGCFGYYQ--- |
6 | 3b8cA2 | 0.20 | 0.09 | 0.46 | 0.32 | MRFsearch | | -----------------------------------------------------------STCKQGEIEAVVIATGVH------------------------TFFGKAAHHFQKVLTAIGNFCICSIAIGMVIEIIDNLLVLLIGGIPIAMPTVL |
7 | 6bo4A2 | 0.10 | 0.08 | 0.82 | 0.46 | FFAS-3D | | ---QLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGPYQPLSRKFTEWCY-----------GPVRVSLYDLSSVDSWEK-----NSVLEIIAFHCKSPNRHRMVVLELNKLLQEKWDRLVSRFFFNFACYLVYMFIFTVVAYH-------- |
8 | 6ajfA | 0.11 | 0.10 | 0.90 | 0.83 | SPARKS-K | | QFDKLFPGFRTEPLTLVMKREDGEPITDAQIADMRAKALTNDPEKMWKERPANDSGSKDP----SVRVIQNGLENRDELRAL------------QPPHGIEVFVGGTPALEQDSIHSLFDKLPLMALILIVTTTVLMFLAFVVLPIKAALMSAL |
9 | 5ldwM | 0.14 | 0.05 | 0.32 | 0.69 | CNFpred | | ---------------------------------------------------------------------------------------------------------SSVSHMALVIVAILIQTPWSYMGATALMIAHGLTSSMLFCLANSNYERI |
10 | 6lcpA | 0.05 | 0.04 | 0.77 | 0.83 | DEthreader | | --E--PIQFPGHDMNAGTK-VGIEYIIKLWVLLL-MDLLRLTN--LVIDLCVVVKLVMTLSI-ANDVA------------------------GRQAVMSFAIGQRFL--QRLVLVHGRWSYRRLAETISNFFYKNMIWTWSIFWYQCYCNFDI- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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