Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | NWTSQDSLRLNRLLKGEGEVKLNPEVLKELEMNSSLGTPKAVTDKSWMDFDNSLPVIPKVPEKKVVLTLRPYTANTKYNWDPIYQKKIKVDKDTWRGDEFYALKILMIPTNWAKHPFDAGPRETVEQIEATGLRYRVTERANNMAVGGWQGTSGGGISGLDLMAPFTREFWNFKGRKRRAR |
1 | 2ls6A | 0.05 | 0.03 | 0.73 | 0.67 | DisCoVER | | ----MASDPNRIIA----TYISN--RQ-DA----------PTGNPDNIFD---NN-A--S----TELVYKNPNRIDVG-TYVGVK--YSN--PITLNNVEFLMGANDTMQKAKIQYT--VDGREWIDLEEGVEYTMPGAIKVVRGVRLIATE-ARENTWLGVRDINV-NKKED-------- |
2 | 1hmwA | 0.03 | 0.02 | 0.81 | 0.67 | DEthreader | | -IRGMDF-V-HH--QFWNDMVRSLGRYLSAYIMPVW--I--WGEQGSNFAGGVASAYALD-SLQAKKAWFF----FDK-EI---VCLGAGI--NSNA---ITTTLNQSWLNGPVISTAGTKITTFKAFWYFPEGANLSLSQQKLWINHGA------YIV-----NTNQLQIAVLWAADPAG |
3 | 1tu5A3 | 0.06 | 0.06 | 1.00 | 0.46 | CEthreader | | GLGAFSGPRVFDVRFQGERLAYEQEAGAVYGGNTPAAMLTRYMDSGFGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNKHSDFLSHYFGGVAQTVLVFRSVSTMLNDYVWDMVFYPNGAIEVKLHATGYISSAFLFGAARRYGNQVGEHTLGPVHTHSAHYKVDLD |
4 | 6nmiD1 | 0.06 | 0.06 | 0.94 | 0.50 | EigenThreader | | ELPSLAKNWVMRMLFLEQPLPAEERWEVVLHFMVGSPSAAVSQDLAQLLSQAGLMKSLSFSTLGLVFQR-----------KRKSRRYYPTRLAINLSSGVSGAGGVVETNYYTESELQIALIALFSEMLYPNMVVAQVTTAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRL |
5 | 6zymu | 0.18 | 0.10 | 0.59 | 0.25 | HHpred | | -----------------------------------------------PDFDPSIPKLKLPKDRQYVVRLAPFNMRKTCGE-YIYKGKFNARKEVYLGLPIFRFYI--------KCTRCLAEI--TFKTDPENTDYTMEHGA--------TR----NFQLNNPMKVLENRTKDSKLE----- |
6 | 2pffB | 0.24 | 0.07 | 0.28 | 0.68 | MRFsearch | | ----------------------------------------------------------------------------------------------------------------------------------TGVRVIVAGTDYGFKQGGGGGGGGGGGGGGGMDLYKTSKAAQDVWNRADNH |
7 | 6rlbD | 0.13 | 0.10 | 0.83 | 0.33 | FFAS-3D | | --SQYDIPRLAAFLRRVEAM-VIRELNKNWQSHAFDGFEVNWTEQQQMVSCLYTLGYPPAQAQGLHVTSISWNS----TGSVVACAYGRLDHGDWSTLKSFVCA-------WNLDRRDLRPQQPSAVVEVPSAVLCLAFHPTQPSH----VAGGLYSGEVLV--------WDLSRLE---- |
8 | 5h7iC | 0.12 | 0.12 | 0.98 | 0.71 | SPARKS-K | | SDEEQLLPVVRAILLQHDTFLLNKAVLDALLAGLTTKDL----PDTSQGFDANFTGTLPLEDDVWLEQYIFDTDQLRFDRKCRNESLCSIYSRLFKGLFFAQLCVKSVSSAELQDCISTSHYATKLTRCAKAIRYKPSTMATDNSWVSIDEPDCLLFHTGTLLARWSQGMHPLQIDPRANI |
9 | 6gc1A | 0.18 | 0.07 | 0.39 | 0.42 | CNFpred | | --LLPAQTSLEYALLDAVKDSLVYQYLQKVDGWEDLSVPEFPEGLEWLNTEEPISVYKDLCGKIVVLDFFTYC------------------------------------------------------------------------------------------------------------ |
10 | 6e60A | 0.05 | 0.04 | 0.75 | 0.67 | DEthreader | | NTDPTIDAQYRTADKVNSVLIYRYLMSIITDTYGD-APFSEAG------VTGDLAGDVT---Q-ANSRLAMRIS-S--VNPTKAQENAAANG--G----VI--SDALIYNSLSQLLFPSYLCFFILNFLKSDNPG------------VVMT-----------AEVKFLMAETVAEFGHTDQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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