Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | YEANVDSYMKIYRSDVWDRYKNDEFEIQDKRNETIKMMKDRFSSFSLDEEFTIYTSLKFGSYDFDKQVFPLNSFSANSYLVERRYNNWSFPKAYKVFFINPEKIGDINMEKDKAKNFLKK |
1 | 3gi9C | 0.04 | 0.03 | 0.88 | 0.83 | DEthreader | | --WAVSMA-VGVMIGASIFIFGVGIATFLSGIYALLVAYSYTLGPIAGLSLWY-SILFAKG--------EIIVFFTAN-GVNASEHINVPI--GGANGLYSALGVLFLFGASITSAVFMI |
2 | 2obdA3 | 0.07 | 0.07 | 1.00 | 0.90 | CEthreader | | MGDEFKAVLETWGFNTNQEIFQEVVGPSQAQVTVHCLKMPKISCQNKGVVVDSSVMVKFLFPRPDQQHSVAYTFEEDIVTTVQASYSKKFLSLLDFQITPKTVSNLTESSSESIQSFLQS |
3 | 3e8wA | 0.05 | 0.04 | 0.80 | 0.75 | EigenThreader | | ---------------VLACMTSAFQQALPTFVAG---------LKGAKKDFHLDATVKGHYTALILTGGQMKLKLKNIHIHLVVAEGVDHVYTVTFDVKDNAQFGLNLFSDTMLTFLNQN |
4 | 5wc3A | 0.09 | 0.07 | 0.72 | 0.22 | HHpred | | ----------------------PKDSIDDYEKEYENQLKEILETIIGVDDVSVVVNVDATVYEKNK---SNKNTKEGGKIKNGDKEQTKKPDGVLVVAQGVD-------NVQIKQTIIE- |
5 | 1cy8A | 0.09 | 0.07 | 0.74 | 0.50 | MRFsearch | | --RFMDRVVGYMVSPLLWKKIARGGRVQSVAVRLVVEREREIKAFVPEEFWEVDASTTT-----------------------------PSGEALALQVTHQNDKPFRPVNKEQTQAAVSL |
6 | 3cvzA1 | 0.12 | 0.07 | 0.62 | 0.49 | FFAS-3D | | YTVVKNDWKKAV-KQLQDGLKDNSIDRDAAAEKLYNLVNTQLDKLGDGDYVDFSVDYNLENKDLAKSG------------------------TINVRVIN-------------------- |
7 | 5aiwA | 0.07 | 0.06 | 0.83 | 0.71 | SPARKS-K | | SEKIIKEFYKTVYQKEISMTTVKELATDNVYQELQNEINVNNSYSPQNTIQKSSV---------NENEIKILAYESKQQYLVTAPNDFEINQLIQIKITQRTTIQLGEE----------- |
8 | 1a6rA | 0.13 | 0.12 | 0.97 | 0.51 | CNFpred | | WNSLLTTKLREFAETLRTALKERDSIIVTLREQMQREIFRLMSLFQPNEQFTWEYTIKSTPLEFASKYAKLD---PSTPVSLINDPRHPYGKLIKIDRLGGDAVIYLNVDNETLSKLVVK |
9 | 6fgzA | 0.05 | 0.04 | 0.92 | 0.83 | DEthreader | | IMVVILATLGLKLG-YIGLPQLGTNTLARTLSTLLMKHIDTLPSIKEFSYGIIFIYAELMEGLLLVKKITFPPACV-LVELRLALNET------L-LKPCLMVQLIAETIVITLLAFD-R |
10 | 5jubA | 0.10 | 0.10 | 0.99 | 0.48 | MUSTER | | NITIPDEYYEMKNRLIKFPTYRNPDRIKSKLTLIEEVYEKFFDILPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKRKFSTNDLLVIDYY-FFHLYGRKYDKKLFERIIKR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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